RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SNX11Q9Y5W9 270 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 CRYBG3Q68DQ2 2970 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 DNHD1Q96M86 4753 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 TRAV19A0A0A6YYK7 116 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 ANO9A1A5B4 782 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 KCNK3O14649 394 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 ZBTB24O43167 697 aaPredicted RBP12.88□□□□□ -0.35
USP11-208ENST00000480104 PCDHGA12O60330 932 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 SLITRK3O94933 977 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 CD6P30203 668 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
USP11-208ENST00000480104 EIF2DP41214 584 aaKnown RBP12.88□□□□□ -0.35
USP11-208ENST00000480104 TNFSF9P41273 254 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 AARSP49588 968 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP11-208ENST00000480104 CSNK1EP49674 416 aaKnown RBP12.88□□□□□ -0.35
USP11-208ENST00000480104 IL9RQ01113 521 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 INAVAQ3KP66 663 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 TRMT11Q7Z4G4 463 aaKnown RBP12.88□□□□□ -0.35
USP11-208ENST00000480104 APBB1IPQ7Z5R6 666 aaPredicted RBP12.88□□□□□ -0.35
USP11-208ENST00000480104 MIB1Q86YT6 1006 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 DEPTORQ8TB45 409 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 KCNE4Q8WWG9 221 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 TOE1Q96GM8 510 aaKnown RBP12.88□□□□□ -0.35
USP11-208ENST00000480104 FAM20AQ96MK3 541 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 GPR174Q9BXC1 333 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 SLCO1B1Q9Y6L6 691 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 ANK1P16157 1881 aa12.88□□□□□ -0.35
USP11-208ENST00000480104 OBSL1O75147 1896 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 A0A087WWV3 80 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 A0A0A0MRY4 1105 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 BLACEA4D250 179 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 LYPLA2O95372 231 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 HAPLN1P10915 354 aaPredicted RBP12.87□□□□□ -0.35
USP11-208ENST00000480104 POU3F2P20265 443 aaPredicted RBP12.87□□□□□ -0.35
USP11-208ENST00000480104 ACADVLP49748 655 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 TLE1Q04724 770 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 DHCR24Q15392 516 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 DCAF12L1Q5VU92 463 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 KIAA1324Q6UXG2 1013 aaKnown RBP12.87□□□□□ -0.35
USP11-208ENST00000480104 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 PHTF2Q8N3S3 785 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 ARL14EPQ8N8R7 260 aaPredicted RBP12.87□□□□□ -0.35
USP11-208ENST00000480104 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 IPO4Q8TEX9 1081 aaKnown RBP12.87□□□□□ -0.35
USP11-208ENST00000480104 LIN37Q96GY3 246 aaPredicted RBP12.87□□□□□ -0.35
USP11-208ENST00000480104 EIF2B4Q9UI10 523 aaKnown RBP12.87□□□□□ -0.35
USP11-208ENST00000480104 HCN2Q9UL51 889 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 STK36Q9NRP7 1315 aa12.87□□□□□ -0.35
USP11-208ENST00000480104 MYLKQ15746 1914 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 E2F8A0AVK6 867 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 K7ENP7 123 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 SCAMP3O14828 347 aaKnown RBP12.86□□□□□ -0.35
USP11-208ENST00000480104 C1SP09871 688 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 CDK4P11802 303 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 TYMPP19971 482 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 GLDCP23378 1020 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 NTSR1P30989 418 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 GPR15P49685 360 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
USP11-208ENST00000480104 INF2Q27J81 1249 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 ZNF568Q3ZCX4 644 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 INO80CQ6PI98 192 aaPredicted RBP12.86□□□□□ -0.35
USP11-208ENST00000480104 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 PIGOQ8TEQ8 1089 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 LRRC15Q8TF66 581 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 RUFY2Q8WXA3 655 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 HAS1Q92839 578 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 CNDP2Q96KP4 475 aaKnown RBP12.86□□□□□ -0.35
USP11-208ENST00000480104 MRGPRX1Q96LB2 322 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 ZNF578Q96N58 590 aaPredicted RBP12.86□□□□□ -0.35
USP11-208ENST00000480104 C22orf23Q9BZE7 217 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 ABI2Q9NYB9 513 aaPredicted RBP12.86□□□□□ -0.35
USP11-208ENST00000480104 GCNT4Q9P109 453 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 ARHGAP26Q9UNA1 814 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 TNFSF13BQ9Y275 285 aa12.86□□□□□ -0.35
USP11-208ENST00000480104 SPENQ96T58 3664 aaKnown RBP12.86□□□□□ -0.35
USP11-208ENST00000480104 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 H0Y8X5 98 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 TCF3P15923 654 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 AFF3P51826 1226 aaKnown RBP12.85□□□□□ -0.35
USP11-208ENST00000480104 ZXDBP98169 803 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 SDHAF4Q5VUM1 108 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 B4GALNT3Q6L9W6 998 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 LAYNQ6UX15 382 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 CADM4Q8NFZ8 388 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 IGSF8Q969P0 613 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 MTMR9Q96QG7 549 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 ACOX2Q99424 681 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 EIF2AK1Q9BQI3 630 aaKnown RBP12.85□□□□□ -0.35
USP11-208ENST00000480104 ZCWPW1Q9H0M4 648 aa12.85□□□□□ -0.35
USP11-208ENST00000480104 WSB2Q9NYS7 404 aaPredicted RBP12.85□□□□□ -0.35
USP11-208ENST00000480104 NAP1L2Q9ULW6 460 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms