RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 ZMIZ2Q8NF64 920 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 COG1Q8WTW3 980 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 HES6Q96HZ4 224 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 PIWIL1Q96J94 861 aaKnown RBP11.81□□□□□ -0.52
APTX-223ENST00000479656 CAPZA3Q96KX2 299 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 ZBED2Q9BTP6 218 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 TTPALQ9BTX7 342 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 TMEM30AQ9NV96 361 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 SPOPO43791 374 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 GRAP2O75791 330 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 PROSCO94903 275 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 GJB5O95377 273 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 EFEMP2O95967 443 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 ACADSBP45954 432 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 ARPP19P56211 112 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 SLC6A3Q01959 620 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 TAP1Q03518 808 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 TUBB2AQ13885 445 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 TAF5Q15542 800 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 COL13A1Q5TAT6 717 aaPredicted RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 DAB2IPQ5VWQ8 1189 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 PSRC1Q6PGN9 363 aaPredicted RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 PRSS55Q6UWB4 352 aaPredicted RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 RSPO2Q6UXX9 243 aaPredicted RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 SPATA2LQ8IUW3 424 aaPredicted RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 DCP1BQ8IZD4 617 aaKnown RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 COLGALT1Q8NBJ5 622 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 CLEC4CQ8WTT0 213 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 SMARCD1Q96GM5 515 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 TUBB2BQ9BVA1 445 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 VN1R3Q9BXE9 311 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 IP6K2Q9UHH9 426 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 USTQ9Y2C2 406 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 CCDC85CA6NKD9 419 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 KCNK3O14649 394 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 DDX3YO15523 660 aaKnown RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 TCP1P17987 556 aaKnown RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 LAG3P18627 525 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 CYP2F1P24903 491 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 NDUFV1P49821 464 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 HTRA4P83105 476 aaPredicted RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 ZNF252P-AS1Q0IIN9 211 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 USP41Q3LFD5 358 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 ZNF280DQ6N043 979 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 OLFML1Q6UWY5 402 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 SLC39A11Q8N1S5 342 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 KCTD13Q8WZ19 329 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 HERVK_113Q902F9 699 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 NDRG1Q92597 394 aaKnown RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 KHSRPQ92945 711 aaKnown RBP eCLIP11.8□□□□□ -0.526e-6■□□□□ 9.5
APTX-223ENST00000479656 ABHD8Q96I13 439 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 LBHD1Q9BQE6 289 aaPredicted RBP11.8□□□□□ -0.52
APTX-223ENST00000479656 LRRC4Q9HBW1 653 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 CSNK1G1Q9HCP0 422 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 CYLDQ9NQC7 956 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 TMEM59LQ9UK28 342 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 SLC4A7Q9Y6M7 1214 aa11.8□□□□□ -0.52
APTX-223ENST00000479656 VWA8A3KMH1 1905 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 OR6C75A6NL08 312 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 HHLA1C9JL84 531 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 F8VP50 259 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 H7C4K7 107 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 TBC1D4O60343 1298 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 SLC1A1P43005 524 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 ADIGQ0VDE8 80 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 C4orf50Q6ZRC1 276 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 ANKS3Q6ZW76 656 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 CREG2Q8IUH2 290 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 ZDHHC17Q8IUH5 632 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 RNF168Q8IYW5 571 aaPredicted RBP11.79□□□□□ -0.52
APTX-223ENST00000479656 LRRN4CLQ8ND94 238 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.79□□□□□ -0.52
APTX-223ENST00000479656 RIN2Q8WYP3 895 aaPredicted RBP11.79□□□□□ -0.52
APTX-223ENST00000479656 KRT35Q92764 455 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 CD101Q93033 1021 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 TMEM169Q96HH4 297 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 MS4A14Q96JA4 679 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 PGLYRP2Q96PD5 576 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 UBXN6Q9BZV1 441 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 ABI2Q9NYB9 513 aaPredicted RBP11.79□□□□□ -0.52
APTX-223ENST00000479656 SPG21Q9NZD8 308 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 INSL6Q9Y581 213 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 PTPRSQ13332 1948 aa11.79□□□□□ -0.52
APTX-223ENST00000479656 C2CD2LO14523 706 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 SLU7O95391 586 aaKnown RBP11.78□□□□□ -0.52
APTX-223ENST00000479656 PSMA2P25787 234 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 GRIK1P39086 918 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 MARCKSL1P49006 195 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 TKTL1P51854 596 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 PIGHQ14442 188 aaPredicted RBP11.78□□□□□ -0.52
APTX-223ENST00000479656 NFE2Q16621 373 aaPredicted RBP11.78□□□□□ -0.52
APTX-223ENST00000479656 WHAMMP3Q1A5X7 153 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 KIAA1841Q6NSI8 718 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 CC2D1AQ6P1N0 951 aaPredicted RBP11.78□□□□□ -0.52
APTX-223ENST00000479656 GPRIN1Q7Z2K8 1008 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
APTX-223ENST00000479656 FIBCD1Q8N539 461 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms