RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 B3GALNT2Q8NCR0 500 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 MYCBPAPQ8TBZ2 947 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 KBTBD7Q8WVZ9 684 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 PCED1BQ96HM7 432 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 ZFYVE19Q96K21 471 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 SLITRK1Q96PX8 696 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 GTPBP4Q9BZE4 634 aaKnown RBP9.67□□□□□ -0.86
CMTM1-208ENST00000479381 DPEP3Q9H4B8 488 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 LTB4R2Q9NPC1 389 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 CRTAC1Q9NQ79 661 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 ZMYM5Q9UJ78 669 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 TRAF3IP3Q9Y228 551 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 ZDBF2Q9HCK1 2354 aa9.67□□□□□ -0.86
CMTM1-208ENST00000479381 NUP210Q8TEM1 1887 aaPredicted RBP9.66□□□□□ -0.86
CMTM1-208ENST00000479381 F8VP50 259 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 BIN1O00499 593 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 CLDN5O00501 218 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 GABRDO14764 452 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 CHADO15335 359 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 LRRN2O75325 713 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 AP1G2O75843 785 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 AKAP3O75969 853 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 C4BPAP04003 597 aaKnown RBP9.66□□□□□ -0.86
CMTM1-208ENST00000479381 USP17L7P0C7H9 530 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 FCARP24071 287 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 CCNE1P24864 410 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 ADORA2BP29275 332 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 PRCPP42785 496 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 STARD6P59095 220 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 NOP14P78316 857 aaKnown RBP9.66□□□□□ -0.86
CMTM1-208ENST00000479381 LRRC32Q14392 662 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 PPP2R5DQ14738 602 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 ZACNQ401N2 412 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 CFAP221Q4G0U5 840 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 ZC3H14Q6PJT7 736 aaKnown RBP9.66□□□□□ -0.86
CMTM1-208ENST00000479381 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 ACOT1Q86TX2 421 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 CMTM8Q8IZV2 173 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 PLEKHO2Q8TD55 490 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 TAF4BQ92750 862 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 FBXO32Q969P5 355 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 EXOC4Q96A65 974 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 GSDMAQ96QA5 445 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 NELL2Q99435 816 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 LRRC3Q9BY71 257 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 ZNF518BQ9C0D4 1074 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 KIF9Q9HAQ2 790 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 FAM49BQ9NUQ9 324 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 DMAC2Q9NW81 257 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 CHMP5Q9NZZ3 219 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 CTNND2Q9UQB3 1225 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 PCDHA5Q9Y5H7 936 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 ZNF318Q5VUA4 2279 aa9.66□□□□□ -0.86
CMTM1-208ENST00000479381 TRIM49BA6NDI0 452 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 NRG2O14511 850 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 IKBKBO14920 756 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 GFRA3O60609 400 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 NOL4O94818 638 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 PRAMEF12O95522 483 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 STAU1O95793 577 aaKnown RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 MBL2P11226 248 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 HDCP19113 662 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 TARSP26639 723 aaKnown RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 PPP1R2P41236 205 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 MAGEA11P43364 429 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 SOX9P48436 509 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 NDST1P52848 882 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 FKBP3Q00688 224 aaKnown RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 AMPD2Q01433 879 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 CETN1Q12798 172 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 TPD52L1Q16890 204 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 EDRF1Q3B7T1 1238 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 ZNF394Q53GI3 561 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 KRT39Q6A163 491 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 FAM171BQ6P995 826 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 FAM35AQ86V20 835 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 ARL14EPQ8N8R7 260 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 CXorf38Q8TB03 319 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 SMARCD1Q96GM5 515 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 TIGD1Q96MW7 591 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 SLC46A2Q9BY10 475 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 IL21Q9HBE4 155 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 TMEM8AQ9HCN3 771 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 DMAP1Q9NPF5 467 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-208ENST00000479381 KRT82Q9NSB4 513 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 TDP1Q9NUW8 608 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 GTSE1Q9NYZ3 720 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 PLA2G2EQ9NZK7 142 aa9.65□□□□□ -0.86
CMTM1-208ENST00000479381 BICDL2A1A5D9 508 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MAPK13O15264 365 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 GADD45BO75293 160 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 RTN3O95197 1032 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 VNN1O95497 513 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 F11P03951 625 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 FAM163BP0C2L3 166 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 FAM200BP0CF97 657 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 CCDC130P13994 396 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 HMGA1P17096 107 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms