RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 RSAD1Q9HA92 442 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.2□□□□□ -1.42
CCDC171-207ENST00000478913 ZMYND8Q9ULU4 1186 aaPredicted RBP6.2□□□□□ -1.42
CCDC171-207ENST00000478913 CDYLQ9Y232 598 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 FPGT-TNNI3KV9GXZ4 949 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 SLIT3O75094 1523 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 A0A1B0GTW7 788 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 GAGE12BA1L429 117 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 GAGE12HA6NDE8 117 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 PHGDHO43175 533 aaKnown RBP6.19□□□□□ -1.42
CCDC171-207ENST00000478913 KRT38O76015 456 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 NCR1O76036 304 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 FGFR4P22455 802 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 HMGB2P26583 209 aaKnown RBP6.19□□□□□ -1.42
CCDC171-207ENST00000478913 GNALP38405 381 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 KCNJ5P48544 419 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 ZNF135P52742 658 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-207ENST00000478913 SOX8P57073 446 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 FAM193AP78312 1265 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 SLC25A3Q00325 362 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 HLTFQ14527 1009 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCDC171-207ENST00000478913 FOXR2Q6PJQ5 311 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 MAPKAPK5Q8IW41 473 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 CCAR1Q8IX12 1150 aaKnown RBP6.19□□□□□ -1.42
CCDC171-207ENST00000478913 CELF5Q8N6W0 485 aaKnown RBP6.19□□□□□ -1.42
CCDC171-207ENST00000478913 CACTINQ8WUQ7 758 aaKnown RBP6.19□□□□□ -1.42
CCDC171-207ENST00000478913 SLC25A43Q8WUT9 341 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-207ENST00000478913 SCAMP4Q969E2 229 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 TTC17Q96AE7 1141 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 TLR10Q9BXR5 811 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 PCGF6Q9BYE7 350 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 AKIP1Q9NQ31 210 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 L1RE1Q9UN81 338 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 WDFY4Q6ZS81 3184 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 ABCC6O95255 1503 aa6.19□□□□□ -1.42
CCDC171-207ENST00000478913 PALLDQ8WX93 1383 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 SCN4AP35499 1836 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 CFAP69A5D8W1 941 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 PRSS29PA6NIE9 313 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 ERN1O75460 977 aaKnown RBP6.18□□□□□ -1.42
CCDC171-207ENST00000478913 GPANK1O95872 356 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 HRGP04196 525 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 HLA-DOAP06340 250 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 GYS1P13807 737 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 RHCEP18577 417 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 HDCP19113 662 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 TBX4P57082 545 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 HSD11B2P80365 405 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 FAM189BP81408 668 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 MXRA7P84157 204 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 RHDQ02161 417 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 OCA2Q04671 838 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 ZNF844Q08AG5 666 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 GALEQ14376 348 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 KIAA0753Q2KHM9 967 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 EMC10Q5UCC4 262 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 SWSAP1Q6NVH7 229 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 DARS2Q6PI48 645 aaKnown RBP6.18□□□□□ -1.42
CCDC171-207ENST00000478913 NOL8Q76FK4 1167 aaKnown RBP6.18□□□□□ -1.42
CCDC171-207ENST00000478913 PCSK9Q8NBP7 692 aaKnown RBP6.18□□□□□ -1.42
CCDC171-207ENST00000478913 PDPRQ8NCN5 879 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 SIK2Q9H0K1 926 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 GPR35Q9HC97 309 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 PIH1D1Q9NWS0 290 aaKnown RBP6.18□□□□□ -1.42
CCDC171-207ENST00000478913 SPTBN4Q9H254 2564 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 ANKRD36BQ8N2N9 1353 aa6.18□□□□□ -1.42
CCDC171-207ENST00000478913 CCDC88AQ3V6T2 1871 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 NSD3Q9BZ95 1437 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 CAND2O75155 1236 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 PEX11BO96011 259 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 CHEK2O96017 543 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 CFIP05156 583 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 KITP10721 976 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 PTGS2P35354 604 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 DGCR2P98153 550 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 PIGFQ07326 219 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 FOXE3Q13461 319 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 TUBA3CQ13748 450 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 SLC9C1Q4G0N8 1177 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 RNF220Q5VTB9 566 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 TUBA3EQ6PEY2 450 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 C2CD5Q86YS7 1000 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 LRTOMTQ8WZ04 291 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 ZNF503Q96F45 646 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 MRGPRX1Q96LB2 322 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 MED15Q96RN5 788 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 C22orf23Q9BZE7 217 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 TINAGL1Q9GZM7 467 aaPredicted RBP6.17□□□□□ -1.42
CCDC171-207ENST00000478913 ATP6V0A4Q9HBG4 840 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 THEGQ9P2T0 379 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 MTO1Q9Y2Z2 717 aaKnown RBP6.17□□□□□ -1.42
CCDC171-207ENST00000478913 INSRP06213 1382 aa6.17□□□□□ -1.42
CCDC171-207ENST00000478913 CCDC78A2IDD5 438 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 E9PLN8 166 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 M0QYG6 137 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 GOLIM4O00461 696 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 MGEA5O60502 916 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 PPFIA4O75335 1185 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 NDUFA10O95299 355 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms