RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 P4HA2O15460 535 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
HMGA1-206ENST00000478214 AVPR2P30518 371 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 AVPR1AP37288 418 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 PFKPQ01813 784 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 CETN1Q12798 172 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 IFRD2Q12894 506 aaPredicted RBP16.53■□□□□ 0.24
HMGA1-206ENST00000478214 TPD52L1Q16890 204 aaPredicted RBP16.53■□□□□ 0.24
HMGA1-206ENST00000478214 SLC44A4Q53GD3 710 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 CREBRFQ8IUR6 639 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 NUP93Q8N1F7 819 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 TTC39CQ8N584 583 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 SLC4A11Q8NBS3 891 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 ZMIZ2Q8NF64 920 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 CYFIP2Q96F07 1278 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 SLC22A12Q96S37 553 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 HNRNPABQ99729 332 aaKnown RBP16.53■□□□□ 0.24
HMGA1-206ENST00000478214 EHD2Q9NZN4 543 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 DACH1Q9UI36 760 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 SOBPA7XYQ1 873 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 STK25O00506 426 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 TNFRSF10BO14763 440 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 FAM200BP0CF97 657 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 ERCC5P28715 1186 aaPredicted RBP16.52■□□□□ 0.24
HMGA1-206ENST00000478214 RAD23BP54727 409 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 MAP3K7CLP57077 242 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 FCHO2Q0JRZ9 810 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 TAF10Q12962 218 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 ASTLQ6HA08 431 aaPredicted RBP16.52■□□□□ 0.24
HMGA1-206ENST00000478214 RBM43Q6ZSC3 357 aaKnown RBP16.52■□□□□ 0.24
HMGA1-206ENST00000478214 YAF2Q8IY57 180 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 EHBP1Q8NDI1 1231 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 SCAMP5Q8TAC9 235 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 KAT5Q92993 513 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 USP13Q92995 863 aaPredicted RBP16.52■□□□□ 0.24
HMGA1-206ENST00000478214 TMEM176AQ96HP8 235 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 HEXIM2Q96MH2 286 aaKnown RBP16.52■□□□□ 0.24
HMGA1-206ENST00000478214 NT5C1BQ96P26 610 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 CYP2S1Q96SQ9 504 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 DNAI2Q9GZS0 605 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 FAM124BQ9H5Z6 455 aaPredicted RBP16.52■□□□□ 0.24
HMGA1-206ENST00000478214 TBC1D17Q9HA65 648 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 CSNK1G1Q9HCP0 422 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 OBP2AQ9NY56 170 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 TRPM5Q9NZQ8 1165 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 CCL26Q9Y258 94 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 HCN4Q9Y3Q4 1203 aa16.52■□□□□ 0.24
HMGA1-206ENST00000478214 ZNF318Q5VUA4 2279 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 C2orf78A6NCI8 922 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 ZNF263O14978 683 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 PI15O43692 258 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 RTN3O95197 1032 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-206ENST00000478214 MBD3O95983 291 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 RFX1P22670 979 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 TBXAS1P24557 533 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-206ENST00000478214 YWHAQP27348 245 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 CLCN5P51795 746 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 SLC5A3P53794 718 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 MLF2Q15773 248 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-206ENST00000478214 PPP1R26Q5T8A7 1209 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-206ENST00000478214 CLEC20AQ6ZU45 233 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 PPM1KQ8N3J5 372 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 CELF5Q8N6W0 485 aaKnown RBP16.51■□□□□ 0.23
HMGA1-206ENST00000478214 UBR7Q8N806 425 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 TMEM105Q8N8V8 129 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 DNASE1L2Q92874 299 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 IRF7Q92985 503 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 HEBP1Q9NRV9 189 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 TDP1Q9NUW8 608 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 IL37Q9NZH6 218 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 GCNT4Q9P109 453 aa16.51■□□□□ 0.23
HMGA1-206ENST00000478214 TRAV19A0A0A6YYK7 116 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 ZNF840PA6NDX5 716 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 ARNTLO00327 626 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 CHADO15335 359 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 ABL1P00519 1130 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 CKMP06732 381 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 AOC1P19801 751 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 MTIF2P46199 727 aaKnown RBP16.5■□□□□ 0.23
HMGA1-206ENST00000478214 STARD6P59095 220 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 YWHAEP62258 255 aaKnown RBP16.5■□□□□ 0.23
HMGA1-206ENST00000478214 HSP90AA4PQ58FG1 418 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 RRAGAQ7L523 313 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 ARHGEF19Q8IW93 802 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 ARL14EPQ8N8R7 260 aaPredicted RBP16.5■□□□□ 0.23
HMGA1-206ENST00000478214 RIN3Q8TB24 985 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 BPIFB1Q8TDL5 484 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 FBXO32Q969P5 355 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 JAKMIP2Q96AA8 810 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 SHDQ96IW2 340 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 ZFYVE19Q96K21 471 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 SLITRK1Q96PX8 696 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 FOXQ1Q9C009 403 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 INTS2Q9H0H0 1204 aaKnown RBP16.5■□□□□ 0.23
HMGA1-206ENST00000478214 THAP9Q9H5L6 903 aa16.5■□□□□ 0.23
HMGA1-206ENST00000478214 CHORDC1Q9UHD1 332 aaPredicted RBP16.5■□□□□ 0.23
HMGA1-206ENST00000478214 HHLA1C9JL84 531 aa16.49■□□□□ 0.23
HMGA1-206ENST00000478214 USP17L7P0C7H9 530 aa16.49■□□□□ 0.23
HMGA1-206ENST00000478214 HDCP19113 662 aa16.49■□□□□ 0.23
HMGA1-206ENST00000478214 ACO1P21399 889 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms