RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 OASLQ15646 514 aaKnown RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 ATP13A4Q4VNC1 1196 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 LRRC8DQ7L1W4 858 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 SLC26A9Q7LBE3 791 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 PHLDB2Q86SQ0 1253 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TMEM86AQ8N2M4 240 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 OR10T2Q8NGX3 314 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 UROC1Q96N76 676 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 RSAD1Q9HA92 442 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 SEPT11Q9NVA2 429 aaKnown RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TMLHEQ9NVH6 421 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 hCG_1818297A0A087WSY0 165 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 AMHP03971 560 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 FAM153BP0C7A2 387 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 SELPP16109 830 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 SLC7A5Q01650 507 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 PPP2R5EQ16537 467 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 FAM153CQ494X1 144 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 ZNF280BQ86YH2 543 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 ZDHHC17Q8IUH5 632 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 RAPGEF5Q92565 580 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 C18orf8Q96DM3 657 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 DUSP16Q9BY84 665 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 FAM153AQ9UHL3 310 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 ENPP3O14638 875 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 TNFRSF10BO14763 440 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 CCL5P13501 91 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 PTPN9P43378 593 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 RWDD2BP57060 319 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 SLC24A5Q71RS6 500 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 GPRIN1Q7Z2K8 1008 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 LRRTM3Q86VH5 581 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 ERICH1Q86X53 443 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 DPF3Q92784 378 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 SMOQ99835 787 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 ASNSD1Q9NWL6 643 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 IL37Q9NZH6 218 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 M0QYV0 167 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 CEP104O60308 925 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 CARSP49589 748 aaKnown RBP12.78□□□□□ -0.36
PRPF39-203ENST00000477626 HDAC4P56524 1084 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 COPS2P61201 443 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 TUSC3Q13454 348 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 KCTD19Q17RG1 926 aaPredicted RBP12.78□□□□□ -0.36
PRPF39-203ENST00000477626 RSPH1Q8WYR4 309 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 SENP8Q96LD8 212 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 GLT1D1Q96MS3 346 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 KRT12Q99456 494 aa12.78□□□□□ -0.36
PRPF39-203ENST00000477626 MYLKQ15746 1914 aa12.77□□□□□ -0.36
PRPF39-203ENST00000477626 TRUB2O95900 331 aaKnown RBP12.77□□□□□ -0.36
PRPF39-203ENST00000477626 GNL1P36915 607 aaPredicted RBP12.77□□□□□ -0.36
PRPF39-203ENST00000477626 FNTAP49354 379 aa12.77□□□□□ -0.36
PRPF39-203ENST00000477626 MRPS25P82663 173 aaKnown RBP12.77□□□□□ -0.36
PRPF39-203ENST00000477626 CLUL1Q15846 466 aa12.77□□□□□ -0.36
PRPF39-203ENST00000477626 UAP1Q16222 522 aaPredicted RBP12.77□□□□□ -0.36
PRPF39-203ENST00000477626 PM20D1Q6GTS8 502 aa12.77□□□□□ -0.36
PRPF39-203ENST00000477626 SLC39A5Q6ZMH5 540 aa12.77□□□□□ -0.36
PRPF39-203ENST00000477626 RHOT1Q8IXI2 618 aa12.77□□□□□ -0.36
PRPF39-203ENST00000477626 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.77□□□□□ -0.36
PRPF39-203ENST00000477626 DDX47Q9H0S4 455 aaKnown RBP12.77□□□□□ -0.36
PRPF39-203ENST00000477626 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.36
PRPF39-203ENST00000477626 AAASQ9NRG9 546 aa12.77□□□□□ -0.36
PRPF39-203ENST00000477626 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.36
PRPF39-203ENST00000477626 OAZ2O95190 189 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
PRPF39-203ENST00000477626 SKIP12755 728 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 SLC6A3Q01959 620 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.37
PRPF39-203ENST00000477626 LIN9Q5TKA1 542 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 GSPT2Q8IYD1 628 aaKnown RBP12.77□□□□□ -0.37
PRPF39-203ENST00000477626 TSEN2Q8NCE0 465 aaKnown RBP12.77□□□□□ -0.37
PRPF39-203ENST00000477626 APPL2Q8NEU8 664 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 HEXIM2Q96MH2 286 aaKnown RBP12.77□□□□□ -0.37
PRPF39-203ENST00000477626 APOL6Q9BWW8 343 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 VN1R3Q9BXE9 311 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 DCLK3Q9C098 648 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 PARP2Q9UGN5 583 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 HPCAL4Q9UM19 191 aa12.77□□□□□ -0.37
PRPF39-203ENST00000477626 M0QZ92 97 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 UBL4BQ8N7F7 174 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 SLC35B2Q8TB61 432 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 PGAP3Q96FM1 320 aaPredicted RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 HSFY1Q96LI6 401 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 CYB561D2O14569 222 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 TYMPP19971 482 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 ITGB8P26012 769 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 DHX34Q14147 1143 aaKnown RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 TMEM132AQ24JP5 1023 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 MTERF4Q7Z6M4 381 aaKnown RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 MYCBPAPQ8TBZ2 947 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 SLC2A14Q8TDB8 520 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 BCL7CQ8WUZ0 217 aaPredicted RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 ZNF689Q96CS4 500 aaPredicted RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 TRIM6Q9C030 488 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms