RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 SAMD7Q7Z3H4 446 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 CHSY1Q86X52 802 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 XYLT1Q86Y38 959 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 APOBEC3FQ8IUX4 373 aaKnown RBP18.93■□□□□ 0.62
CCM2-209ENST00000477605 ZNF276Q8N554 614 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 JOSD2Q8TAC2 188 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 RNPEPL1Q9HAU8 725 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 ASNSD1Q9NWL6 643 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 XPO7Q9UIA9 1087 aaKnown RBP18.93■□□□□ 0.62
CCM2-209ENST00000477605 HAO1Q9UJM8 370 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 ACKR2O00590 384 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 CD19P15391 556 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 TARSP26639 723 aaKnown RBP18.92■□□□□ 0.62
CCM2-209ENST00000477605 GMPSP49915 693 aaPredicted RBP18.92■□□□□ 0.62
CCM2-209ENST00000477605 DYNLT1P63172 113 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 CNTN2Q02246 1040 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 DPYSL3Q14195 570 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 RFX6Q8HWS3 928 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 SLC4A11Q8NBS3 891 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 MCRS1Q96EZ8 462 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 THOC1Q96FV9 657 aaKnown RBP18.92■□□□□ 0.62
CCM2-209ENST00000477605 SLC5A4Q9NY91 659 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 ZFP69BQ9UJL9 534 aa18.92■□□□□ 0.62
CCM2-209ENST00000477605 COL11A1P12107 1806 aaPredicted RBP18.92■□□□□ 0.62
CCM2-209ENST00000477605 MYH9P35579 1960 aaKnown RBP18.92■□□□□ 0.62
CCM2-209ENST00000477605 MT-ND3P03897 115 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 CALB2P22676 271 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 TCF7P36402 384 aaPredicted RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 FAM47CQ5HY64 1035 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 ZNF667Q5HYK9 610 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 UNC45BQ8IWX7 931 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 RNF149Q8NC42 400 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 TCP10LQ8TDR4 215 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 TBC1D10AQ9BXI6 508 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 FAM124BQ9H5Z6 455 aaPredicted RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 MANSC1Q9H8J5 431 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 AFG3L2Q9Y4W6 797 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 HGSO14964 777 aaPredicted RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 ENDOD1O94919 500 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 TRUB2O95900 331 aaKnown RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 LMNAP02545 664 aaKnown RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 DHRS4L1P0CG22 281 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 ADRA1DP25100 572 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 RAD23BP54727 409 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 TFDP2Q14188 446 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 BBS9Q3SYG4 887 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 SCARA5Q6ZMJ2 495 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 KIAA0319LQ8IZA0 1049 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 ENDOVQ8N8Q3 282 aaKnown RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 APBB2Q92870 758 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 MRRFQ96E11 262 aaKnown RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 KLRG1Q96E93 195 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 WDR83Q9BRX9 315 aaKnown RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 TRIM55Q9BYV6 548 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 MIS12Q9H081 205 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 FZD8Q9H461 694 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 SYNCQ9H7C4 482 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 CYP3A43Q9HB55 503 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 PNPLA8Q9NP80 782 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 SAE1Q9UBE0 346 aaPredicted RBP18.91■□□□□ 0.62
CCM2-209ENST00000477605 CYTH4Q9UIA0 394 aa18.91■□□□□ 0.62
CCM2-209ENST00000477605 LOC285556D6RIA3 1793 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 CEP350Q5VT06 3117 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 LIN7AO14910 233 aaPredicted RBP18.9■□□□□ 0.62
CCM2-209ENST00000477605 LGR5O75473 907 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 BANF1O75531 89 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 TMEM63AO94886 807 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 LUC7L3O95232 432 aaKnown RBP18.9■□□□□ 0.62
CCM2-209ENST00000477605 SRGAP2CP0DJJ0 459 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 RBP3P10745 1247 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 SLC18A2Q05940 514 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 FSTL1Q12841 308 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 SMTNL2Q2TAL5 461 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 TAF1BQ53T94 588 aaPredicted RBP18.9■□□□□ 0.62
CCM2-209ENST00000477605 CMPK2Q5EBM0 449 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 ATF7IP2Q5U623 682 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 PLPPR4Q7Z2D5 763 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 LONP2Q86WA8 852 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 RIOX2Q8IUF8 465 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 FAM13CQ8NE31 585 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 SLC44A1Q8WWI5 657 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 MTO1Q9Y2Z2 717 aaKnown RBP18.9■□□□□ 0.62
CCM2-209ENST00000477605 IKBKGQ9Y6K9 419 aa18.9■□□□□ 0.62
CCM2-209ENST00000477605 CHADO15335 359 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 DNAJC6O75061 913 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 FGFR1P11362 822 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 GNAZP19086 355 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 MIPP30301 263 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 ATICP31939 592 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 NOMO1Q15155 1222 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 KCNT1Q5JUK3 1230 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 ANKRD20A2Q5SQ80 823 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 ANKRD20A1Q5TYW2 823 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 ANKRD20A3Q5VUR7 823 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 LBX2Q6XYB7 198 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 CLNKQ7Z7G1 428 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 GPC2Q8N158 579 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 STK32AQ8WU08 396 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 CPXM1Q96SM3 734 aa18.89■□□□□ 0.62
CCM2-209ENST00000477605 METTL5Q9NRN9 209 aaKnown RBP18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms