RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SLC2A14Q8TDB8 520 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 USP13Q92995 863 aaPredicted RBP18.76■□□□□ 0.59
PTPN7-209ENST00000477554 SMOQ99835 787 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 BPIFA3Q9BQP9 254 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 TRMT61BQ9BVS5 477 aaKnown RBP18.76■□□□□ 0.59
PTPN7-209ENST00000477554 NIF3L1Q9GZT8 377 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 BRD9Q9H8M2 597 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 TRPC7Q9HCX4 862 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 FAM86C1Q9NVL1 165 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 ZNF165P49910 485 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 STARD6P59095 220 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 ENPEPQ07075 957 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 INCA1Q0VD86 236 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 LRMPQ12912 555 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 PAK1Q13153 545 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 VSTM1Q6UX27 236 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 TPRG1Q6ZUI0 275 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 C11orf57Q6ZUT1 292 aaPredicted RBP18.75■□□□□ 0.59
PTPN7-209ENST00000477554 GPRIN1Q7Z2K8 1008 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 TAF4BQ92750 862 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 TRMT2BQ96GJ1 504 aaKnown RBP18.75■□□□□ 0.59
PTPN7-209ENST00000477554 SPATA17Q96L03 361 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 MED10Q9BTT4 135 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 DDX23Q9BUQ8 820 aaKnown RBP18.75■□□□□ 0.59
PTPN7-209ENST00000477554 KRT82Q9NSB4 513 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 RAB20Q9NX57 234 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 DLGAP2Q9P1A6 1054 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 MYH10P35580 1976 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 PATJQ8NI35 1801 aa18.75■□□□□ 0.59
PTPN7-209ENST00000477554 BICDL2A1A5D9 508 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 H0Y858 1186 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 CILPO75339 1184 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 CALCAP01258 141 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 ADORA2BP29275 332 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 GTF2H1P32780 548 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 CLCN5P51795 746 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 FCHO2Q0JRZ9 810 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 MAPRE1Q15691 268 aaKnown RBP18.74■□□□□ 0.59
PTPN7-209ENST00000477554 ARHGAP15Q53QZ3 475 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 TRIM68Q6AZZ1 485 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 DENND5BQ6ZUT9 1274 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 CRYBG2Q8N1P7 616 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 ARL14EPQ8N8R7 260 aaPredicted RBP18.74■□□□□ 0.59
PTPN7-209ENST00000477554 FBXL13Q8NEE6 735 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 C8orf48Q96LL4 319 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 GTSE1Q9NYZ3 720 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 ARMCX3Q9UH62 379 aaPredicted RBP18.74■□□□□ 0.59
PTPN7-209ENST00000477554 RWDD2AQ9UIY3 292 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 MIA3Q5JRA6 1907 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 OTOL1A6NHN0 477 aaPredicted RBP18.74■□□□□ 0.59
PTPN7-209ENST00000477554 TNFRSF10BO14763 440 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 FGF19O95750 216 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 TARSP26639 723 aaKnown RBP18.74■□□□□ 0.59
PTPN7-209ENST00000477554 FILIP1Q7Z7B0 1213 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 MON1AQ86VX9 555 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 CCDC105Q8IYK2 499 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 TTC16Q8NEE8 873 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 PJA1Q8NG27 643 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 KAT5Q92993 513 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 JAKMIP2Q96AA8 810 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 CHFRQ96EP1 664 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 GCNAQ96QF7 691 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 TTLL2Q9BWV7 592 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 SRRTQ9BXP5 876 aaKnown RBP18.74■□□□□ 0.59
PTPN7-209ENST00000477554 GPR88Q9GZN0 384 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 RNF38Q9H0F5 515 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 GCNT4Q9P109 453 aa18.74■□□□□ 0.59
PTPN7-209ENST00000477554 HELZP42694 1942 aaKnown RBP18.73■□□□□ 0.59
PTPN7-209ENST00000477554 SCAMP3O14828 347 aaKnown RBP18.73■□□□□ 0.59
PTPN7-209ENST00000477554 TRIM66O15016 1216 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 AP1G2O75843 785 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 FMO5P49326 533 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 NHLH1Q02575 133 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 TAF10Q12962 218 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 FZD5Q13467 585 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 CCDC40Q4G0X9 1142 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 NAIF1Q69YI7 327 aaPredicted RBP18.73■□□□□ 0.59
PTPN7-209ENST00000477554 TXNDC11Q6PKC3 985 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 ZNF687Q8N1G0 1237 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 CEP63Q96MT8 703 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 COQ4Q9Y3A0 265 aa18.73■□□□□ 0.59
PTPN7-209ENST00000477554 MYO16Q9Y6X6 1858 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 KANSL1LA0AUZ9 987 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 SMTNL1A8MU46 457 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 BECN2A8MW95 431 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 HHLA1C9JL84 531 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 ZNF263O14978 683 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 P4HA1P13674 534 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 ANXA13P27216 316 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 PLA2G5P39877 138 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 MAP3K7CLP57077 242 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 UBXN2BQ14CS0 331 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 PPP1R26Q5T8A7 1209 aaPredicted RBP18.72■□□□□ 0.59
PTPN7-209ENST00000477554 PHLDB3Q6NSJ2 640 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 FOXR2Q6PJQ5 311 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 FRMD5Q7Z6J6 570 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 IRF2BP1Q8IU81 584 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 SLC4A11Q8NBS3 891 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 LMO3Q8TAP4 145 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 ENOX1Q8TC92 643 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms