RNA–Protein interactions for RNA: ENST00000477438.1

PARVB-206, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-206ENST00000477438 LINC01565O15544 149 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 XYLBO75191 536 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 HLA-DRAP01903 254 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 LRG1P02750 347 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 AARSP49588 968 aaKnown RBP eCLIP11.34□□□□□ -0.59
PARVB-206ENST00000477438 CLCN4P51793 760 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 GALCP54803 685 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 BPIFB4P59827 614 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 MYL6P60660 151 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 MRPS5P82675 430 aaKnown RBP11.34□□□□□ -0.59
PARVB-206ENST00000477438 DMTNQ08495 405 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 PLD1Q13393 1074 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 PPM1LQ5SGD2 360 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 SV2AQ7L0J3 742 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 PEX26Q7Z412 305 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 LRRC57Q8N9N7 239 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 FBXL13Q8NEE6 735 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 LNX1Q8TBB1 728 aaPredicted RBP11.34□□□□□ -0.59
PARVB-206ENST00000477438 FAM71BQ8TC56 605 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 SPATA18Q8TC71 538 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 COG1Q8WTW3 980 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 FAM84AQ96KN4 292 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 RIPOR3Q96MK2 946 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 ARID3AQ99856 593 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 PLEKHA4Q9H4M7 779 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 GDAP2Q9NXN4 497 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 PSD3Q9NYI0 1048 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 STIM2Q9P246 746 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 SIX4Q9UIU6 781 aa11.34□□□□□ -0.59
PARVB-206ENST00000477438 MIF4GDA9UHW6 222 aaKnown RBP11.33□□□□□ -0.6
PARVB-206ENST00000477438 SPTLC1O15269 473 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 TGM5O43548 720 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 RTN2O75298 545 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 SASH3O75995 380 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 CYP11A1P05108 521 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 SPATA31D3P0C874 917 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 EPCAMP16422 314 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 YWHAEP62258 255 aaKnown RBP11.33□□□□□ -0.6
PARVB-206ENST00000477438 NOP14P78316 857 aaKnown RBP11.33□□□□□ -0.6
PARVB-206ENST00000477438 CLDN10P78369 228 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 ADAM15Q13444 863 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 MAPRE1Q15691 268 aaKnown RBP11.33□□□□□ -0.6
PARVB-206ENST00000477438 TAF12Q16514 161 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 ZACNQ401N2 412 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 SLC39A12Q504Y0 691 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 RARS2Q5T160 578 aaKnown RBP11.33□□□□□ -0.6
PARVB-206ENST00000477438 ALS2CLQ60I27 953 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 WSCD1Q658N2 575 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 TPGS2Q68CL5 300 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 ANKRD54Q6NXT1 300 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 C8orf74Q6P047 294 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 SPATA31D4Q6ZUB0 917 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 DPH6Q7L8W6 267 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
PARVB-206ENST00000477438 TMEM130Q8N3G9 435 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 KREMEN2Q8NCW0 462 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 HDAC7Q8WUI4 952 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 ATXN2LQ8WWM7 1075 aaKnown RBP11.33□□□□□ -0.6
PARVB-206ENST00000477438 NT5C1BQ96P26 610 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 APOL5Q9BWW9 433 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.33□□□□□ -0.62e-7■■■■□ 23.7
PARVB-206ENST00000477438 DDX43Q9NXZ2 648 aaKnown RBP11.33□□□□□ -0.6
PARVB-206ENST00000477438 POLIQ9UNA4 740 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 PRRC2BQ5JSZ5 2229 aaKnown RBP11.33□□□□□ -0.6
PARVB-206ENST00000477438 ATG2AQ2TAZ0 1938 aa11.33□□□□□ -0.6
PARVB-206ENST00000477438 A6NNZ2 444 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 A8MXQ7 604 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 FOXN3O00409 490 aaPredicted RBP11.32□□□□□ -0.6
PARVB-206ENST00000477438 TBX10O75333 385 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 MTA2O94776 668 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 OAZ2O95190 189 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 STAU1O95793 577 aaKnown RBP11.32□□□□□ -0.6
PARVB-206ENST00000477438 EFEMP2O95967 443 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 C1RP00736 705 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 C4BPAP04003 597 aaKnown RBP11.32□□□□□ -0.6
PARVB-206ENST00000477438 C8AP07357 584 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 GPC5P78333 572 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 ROR1Q01973 937 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 APBA1Q02410 837 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 PPP3CAQ08209 521 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 SMARCB1Q12824 385 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 SMAD4Q13485 552 aaKnown RBP11.32□□□□□ -0.6
PARVB-206ENST00000477438 RAB33AQ14088 237 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 VEPH1Q14D04 833 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 NFE2Q16621 373 aaPredicted RBP11.32□□□□□ -0.6
PARVB-206ENST00000477438 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
PARVB-206ENST00000477438 SLC8B1Q6J4K2 584 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 MAATS1Q7Z4T9 603 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 ZNF677Q86XU0 584 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 SPATA2LQ8IUW3 424 aaPredicted RBP11.32□□□□□ -0.6
PARVB-206ENST00000477438 FAM71AQ8IYT1 594 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
PARVB-206ENST00000477438 TTC39CQ8N584 583 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms