RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ALDH2P05091 517 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 ACRP10323 421 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 LCP1P13796 627 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 NPR3P17342 541 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 PCSK1P29120 753 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 DEFB103AP81534 67 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 ITIH3Q06033 890 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 ATP13A4Q4VNC1 1196 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 RAB6CQ53S08 254 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 INTS6LQ5JSJ4 861 aaKnown RBP15.21■□□□□ 0.03
COL4A6-206ENST00000477085 SH3PXD2AQ5TCZ1 1133 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 CC2D1AQ6P1N0 951 aaPredicted RBP15.21■□□□□ 0.03
COL4A6-206ENST00000477085 FAM35AQ86V20 835 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 ZDHHC14Q8IZN3 488 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 UBL4BQ8N7F7 174 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 MSANTD4Q8NCY6 345 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 IPO4Q8TEX9 1081 aaKnown RBP15.21■□□□□ 0.03
COL4A6-206ENST00000477085 NDRG1Q92597 394 aaKnown RBP15.21■□□□□ 0.03
COL4A6-206ENST00000477085 MYLPFQ96A32 169 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 B3GALT6Q96L58 329 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 RNPC3Q96LT9 517 aaKnown RBP15.21■□□□□ 0.03
COL4A6-206ENST00000477085 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL4A6-206ENST00000477085 MED10Q9BTT4 135 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 RAB6CQ9H0N0 254 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 ADAM28Q9UKQ2 775 aa15.21■□□□□ 0.03
COL4A6-206ENST00000477085 C2CD4BA6NLJ0 364 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 HOXA2O43364 376 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 OAZ2O95190 189 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 FLT3P36888 993 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 NDUFV1P49821 464 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 MAP3K7CLP57077 242 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 MRPS25P82663 173 aaKnown RBP15.21■□□□□ 0.02
COL4A6-206ENST00000477085 SLC6A3Q01959 620 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 ADCY1Q08828 1119 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 MFSD5Q6N075 450 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 TAS1R1Q7RTX1 841 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 ANKS1BQ7Z6G8 1248 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.21■□□□□ 0.02
COL4A6-206ENST00000477085 FNIP1Q8TF40 1166 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 TOP1MTQ969P6 601 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 HSFY1Q96LI6 401 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 AP1M1Q9BXS5 423 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 KRT82Q9NSB4 513 aa15.21■□□□□ 0.02
COL4A6-206ENST00000477085 MICAL3Q7RTP6 2002 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 TCRBV7S2A1N4TA0A589 114 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 HHLA1C9JL84 531 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 FGGP02679 453 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 OR4Q2P0C623 313 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 RAG1P15918 1043 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 PSMA2P25787 234 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 RWDD2BP57060 319 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 YWHAHQ04917 246 aaPredicted RBP15.2■□□□□ 0.02
COL4A6-206ENST00000477085 PIGHQ14442 188 aaPredicted RBP15.2■□□□□ 0.02
COL4A6-206ENST00000477085 C16orf59Q7L2K0 433 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 GPRIN1Q7Z2K8 1008 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 MMGT1Q8N4V1 131 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 UBE2Q2Q8WVN8 375 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 RXFP2Q8WXD0 754 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 ANKRD7Q92527 254 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 RPGRIP1Q96KN7 1286 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 HERPUD2Q9BSE4 406 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 DNAI2Q9GZS0 605 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 CWH43Q9H720 699 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 FAN1Q9Y2M0 1017 aa15.2■□□□□ 0.02
COL4A6-206ENST00000477085 FNDC1Q4ZHG4 1894 aaPredicted RBP15.2■□□□□ 0.02
COL4A6-206ENST00000477085 ABHD14A-ACY1A0A1B0GW23 586 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 PGRMC1O00264 195 aaKnown RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 LRCH4O75427 683 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 AP1G2O75843 785 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 FAM200BP0CF97 657 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 IL1R2P27930 398 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 MRPL58Q14197 206 aaKnown RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 LLGL1Q15334 1064 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 KCTD19Q17RG1 926 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 CCDC14Q49A88 953 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 VARS2Q5ST30 1063 aaKnown RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 RHOT1Q8IXI2 618 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 THEM5Q8N1Q8 247 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 HDAC7Q8WUI4 952 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 KCTD13Q8WZ19 329 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 ZNF689Q96CS4 500 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 PNKPQ96T60 521 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 RHOXF2Q9BQY4 288 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 COLEC11Q9BWP8 271 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 MRPL9Q9BYD2 267 aaKnown RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 ADAM33Q9BZ11 813 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 CSNK1G1Q9HCP0 422 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 CYLDQ9NQC7 956 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 RNF216Q9NWF9 866 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 LTBP2Q14767 1821 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 PSTPIP1O43586 416 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 EFEMP2O95967 443 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 TFE3P19532 575 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 BDNFP23560 247 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 ZNF143P52747 638 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 SLC25A11Q02978 314 aaKnown RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 ADIGQ0VDE8 80 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 C15orf59Q2T9L4 293 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 FAM171A1Q5VUB5 890 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms