RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DPP6P42658 865 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 KCNB1Q14721 858 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 CCDC142Q17RM4 750 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 SV2CQ496J9 727 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 INTS6LQ5JSJ4 861 aaKnown RBP12.21□□□□□ -0.45
BRCA1-213ENST00000476777 LMBRD2Q68DH5 695 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-213ENST00000476777 C19orf48Q6RUI8 117 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 RAB44Q7Z6P3 723 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-213ENST00000476777 HDDC3Q8N4P3 179 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 MYCT1Q8N699 235 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 FIZ1Q96SL8 496 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 DDX43Q9NXZ2 648 aaKnown RBP12.21□□□□□ -0.45
BRCA1-213ENST00000476777 L1RE1Q9UN81 338 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 STYXL1Q9Y6J8 313 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 CEP192Q8TEP8 1941 aa12.21□□□□□ -0.46
BRCA1-213ENST00000476777 PCDH15Q96QU1 1955 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 HELZP42694 1942 aaKnown RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 A0A0A0MRY4 1105 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 TRAK2O60296 914 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 ADAM23O75077 832 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 CYP17A1P05093 508 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 CFIP05156 583 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 ACAT1P24752 427 aaKnown RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 RDXP35241 583 aaKnown RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 PNPLA4P41247 253 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 KIR2DL1P43626 348 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 SLC6A11P48066 632 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 ATP2C1P98194 919 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 GTF2BQ00403 316 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 POU5F1Q01860 360 aaKnown RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 DUOXA1Q1HG43 343 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 ZNF423Q2M1K9 1284 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 HSF5Q4G112 596 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 EMC10Q5UCC4 262 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 ADALQ6DHV7 355 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 CRELD2Q6UXH1 353 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 PDZD3Q86UT5 571 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 GPBP1Q86WP2 473 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 ADGRG2Q8IZP9 1017 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 FSIP1Q8NA03 581 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 HMGB4Q8WW32 186 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 CDK5RAP3Q96JB5 506 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 ZNF560Q96MR9 790 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 DCBLD2Q96PD2 775 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 GTPBP2Q9BX10 602 aaKnown RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 PARVGQ9HBI0 331 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 CAPN10Q9HC96 672 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 BCCIPQ9P287 314 aaKnown RBP eCLIP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 GTF3C4Q9UKN8 822 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 AGO2Q9UKV8 859 aaKnown RBP12.2□□□□□ -0.46
BRCA1-213ENST00000476777 SLC6A14Q9UN76 642 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
BRCA1-213ENST00000476777 PLXNB3Q9ULL4 1909 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 MYMKA6NI61 221 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 LEFTY2O00292 366 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 OPHN1O60890 802 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 FAM13AO94988 1023 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 KAT7O95251 611 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 SERPINF2P08697 491 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 CD59P13987 128 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 TIE1P35590 1138 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 PDE6CP51160 858 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 ATXN3P54252 364 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-213ENST00000476777 WNT7BP56706 349 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 HMGN5P82970 282 aaKnown RBP12.19□□□□□ -0.46
BRCA1-213ENST00000476777 MYL7Q01449 175 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 GFPT1Q06210 699 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-213ENST00000476777 SCAPQ12770 1279 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 BYSLQ13895 437 aaKnown RBP12.19□□□□□ -0.46
BRCA1-213ENST00000476777 DHCR24Q15392 516 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 EOGTQ5NDL2 527 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 SCARA3Q6AZY7 606 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 SLFN12LQ6IEE8 588 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 FILIP1Q7Z7B0 1213 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 OSTM1Q86WC4 334 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 C12orf40Q86WS4 652 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 SCN4BQ8IWT1 228 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 KIAA1958Q8N8K9 716 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 FAM184AQ8NB25 1140 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 CEP76Q8TAP6 659 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 SPATA18Q8TC71 538 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 FUBP3Q96I24 572 aaKnown RBP eCLIP12.19□□□□□ -0.46
BRCA1-213ENST00000476777 PNKPQ96T60 521 aa12.19□□□□□ -0.46
BRCA1-213ENST00000476777 POLMQ9NP87 494 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-213ENST00000476777 TCRBV21S2A2A0A5A6 115 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 VWA3AA6NCI4 1184 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 AP5Z1O43299 807 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 HCRTO43612 131 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 HUS1O60921 280 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 IL18RAPO95256 599 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 APODP05090 189 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 PFKLP17858 780 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 ADSSP30520 456 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 POLR2BP30876 1174 aaKnown RBP12.18□□□□□ -0.46
BRCA1-213ENST00000476777 EIF2DP41214 584 aaKnown RBP12.18□□□□□ -0.46
BRCA1-213ENST00000476777 MAGEA11P43364 429 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 SLC7A9P82251 487 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 HNRNPDQ14103 355 aaKnown RBP12.18□□□□□ -0.46
BRCA1-213ENST00000476777 FAM171BQ6P995 826 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms