RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SMC1BQ8NDV3 1235 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PARD3BQ8TEW8 1205 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PAFAH2Q99487 392 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 MOV10L1Q9BXT6 1211 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RAB6CQ9H0N0 254 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 SLC38A10Q9HBR0 1119 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 CYP4F12Q9HCS2 524 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 NYAP2Q9P242 653 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 HESX1Q9UBX0 185 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 HERC5Q9UII4 1024 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TRAF3IP3Q9Y228 551 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TRIM17Q9Y577 477 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 NUB1Q9Y5A7 615 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 BRWD1Q9NSI6 2320 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 A6NNZ2 444 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 VWA5AO00534 786 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 EDIL3O43854 480 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 UGT1A9O60656 530 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 CCNE2O96020 404 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 FGFR3P22607 806 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 HMGB2P26583 209 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 SERPINB5P36952 375 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ADCYAP1R1P41586 468 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RANBP1P43487 201 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 GDF10P55107 478 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 MAPK6Q16659 721 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 KIZQ2M2Z5 673 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TUBB8Q3ZCM7 444 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ACAD10Q6JQN1 1059 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 IYDQ6PHW0 289 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 USP50Q70EL3 339 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PRPF39Q86UA1 669 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 MCF2L2Q86YR7 1114 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RFWD2Q8NHY2 731 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 JOSD2Q8TAC2 188 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 DIS3LQ8TF46 1054 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF606Q8WXB4 792 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PRR11Q96HE9 360 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 SPATA33Q96N06 139 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RAB3IPQ96QF0 476 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RPS6KC1Q96S38 1066 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 UGT1A7Q9HAW7 530 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 UGT1A10Q9HAW8 530 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 UGT1A8Q9HAW9 530 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 A1CFQ9NQ94 594 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RHBDL2Q9NX52 303 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ZC3H7BQ9UGR2 993 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TMX2Q9Y320 296 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RPTORQ8N122 1335 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 FAM187AA6NFU0 413 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 KBTBD13C9JR72 458 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 hCG_1984214I3L0E3 225 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 DYNC1LI2O43237 492 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 BUD23O43709 281 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 SNX3O60493 162 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PARNO95453 639 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 AKAP5P24588 427 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 CCND2P30279 289 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 POLR2BP30876 1174 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ARL4CP56559 192 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 FAAP100Q0VG06 881 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 UBAP2LQ14157 1087 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 MAP7D1Q3KQU3 841 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ANKRD20A2Q5SQ80 823 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ERMARDQ5T6L9 678 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 VWA5B1Q5TIE3 1220 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ANKRD20A1Q5TYW2 823 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 OLFML2BQ68BL8 750 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RGMBQ6NW40 437 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ANO5Q75V66 913 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ERO1BQ86YB8 467 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TNS4Q8IZW8 715 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 DAW1Q8N136 415 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF713Q8N859 430 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ICA1LQ8NDH6 482 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 STKLD1Q8NE28 680 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 NMD3Q96D46 503 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 KIF12Q96FN5 646 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 HES6Q96HZ4 224 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ANKRD36BP1Q96IX9 119 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RPF1Q9H9Y2 349 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TXLNGQ9NUQ3 528 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 THEGQ9P2T0 379 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 VAV3Q9UKW4 847 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ANKRD36CQ5JPF3 1778 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 XPO1O14980 1071 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 GSTA1P08263 222 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 GSTA2P09210 222 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 RARGP13631 454 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PRLRP16471 622 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 STAT5BP51692 787 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 AQP5P55064 265 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 WNT7BP56706 349 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 SLC25A3Q00325 362 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 CDK17Q00537 523 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 DEUP1Q05D60 604 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TSTA3Q13630 321 aaPredicted RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 KBTBD12Q3ZCT8 623 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 MMEL1Q495T6 779 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms