RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PTPN20Q4JDL3 420 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 OR6B2Q6IFH4 312 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 ZNF280DQ6N043 979 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 TTC30AQ86WT1 665 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 SPATA2LQ8IUW3 424 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-227ENST00000475832 CMTR2Q8IYT2 770 aaKnown RBP12.89□□□□□ -0.35
MRPL55-227ENST00000475832 CRIPAKQ8N1N5 446 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 SMARCD1Q96GM5 515 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 RPGRIP1Q96KN7 1286 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 CPXM1Q96SM3 734 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 EPHX3Q9H6B9 360 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 LRRC4Q9HBW1 653 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 AAASQ9NRG9 546 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 STK39Q9UEW8 545 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 PCDHA11Q9Y5I1 949 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 ALG6Q9Y672 507 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 CCDC66A2RUB6 948 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 CES2O00748 559 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 KCNK3O14649 394 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 AP1G2O75843 785 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 PROSCO94903 275 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 OAZ2O95190 189 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 GALTP07902 379 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 IGFBP4P22692 258 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 MAN1A1P33908 653 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 SCNN1AP37088 669 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 CETN2P41208 172 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 PLA2G4AP47712 749 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 RGS7P49802 495 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 BCAR1P56945 870 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 DEFB103AP81534 67 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-227ENST00000475832 CFAP221Q4G0U5 840 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 C2CD6Q53TS8 623 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 ODF2Q5BJF6 829 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 FAM102AQ5T9C2 384 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-227ENST00000475832 CYP4A22Q5TCH4 519 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 FAM171A1Q5VUB5 890 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 FUT10Q6P4F1 479 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 PHLDB2Q86SQ0 1253 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 TMEM110Q86TL2 294 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 FAM35AQ86V20 835 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 CEP57Q86XR8 500 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 XYLT1Q86Y38 959 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 HERC6Q8IVU3 1022 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 SIX6OS1Q8N1H7 587 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 SLC35F5Q8WV83 523 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 ZNF558Q96NG5 402 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 MCEEQ96PE7 176 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 OSBPL9Q96SU4 736 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 YME1L1Q96TA2 773 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 NCAPGQ9BPX3 1015 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 TLR10Q9BXR5 811 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 SLC4A5Q9BY07 1137 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 UBXN6Q9BZV1 441 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
MRPL55-227ENST00000475832 NME7Q9Y5B8 376 aa12.88□□□□□ -0.35
MRPL55-227ENST00000475832 CTAGE15A4D2H0 777 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 TMEM191CA6NGB0 347 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 E5RJQ4 531 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 SART1O43290 800 aaKnown RBP12.87□□□□□ -0.35
MRPL55-227ENST00000475832 HCRTO43612 131 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 NCK2O43639 380 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 ATP2C2O75185 946 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 FBXO21O94952 628 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 ERBB2P04626 1255 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 ITGB1P05556 798 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 CTAGE8P0CG41 777 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 COMTP21964 271 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 TKTP29401 623 aaKnown RBP12.87□□□□□ -0.35
MRPL55-227ENST00000475832 PPM1AP35813 382 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
MRPL55-227ENST00000475832 DNA2P51530 1060 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 RABGGTBP53611 331 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 AMPD2Q01433 879 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 SMARCB1Q12824 385 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 ACAP1Q15027 740 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 AAK1Q2M2I8 961 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 CTXN3Q4LDR2 81 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
MRPL55-227ENST00000475832 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 FAM171BQ6P995 826 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 ANKS3Q6ZW76 656 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 CTAGE6Q86UF2 777 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 CTAGE4Q8IX94 777 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 FUKQ8N0W3 1084 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 KCTD13Q8WZ19 329 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 MYLPFQ96A32 169 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 TMEM169Q96HH4 297 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 HES6Q96HZ4 224 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 NAP1L3Q99457 506 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-227ENST00000475832 ZBED2Q9BTP6 218 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 B3GNT5Q9BYG0 378 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms