RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 DSC2Q02487 901 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 TARDBPQ13148 414 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 TCEA2Q15560 299 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 CCDC93Q567U6 631 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 TMEM65Q6PI78 240 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 ZNF793Q6ZN11 406 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 LMBR1Q8WVP7 490 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 DPF2Q92785 391 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 TAF15Q92804 592 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 USP7Q93009 1102 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 C6orf106Q9H6K1 298 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 RMI1Q9H9A7 625 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 GABRQQ9UN88 632 aa3.28□□□□□ -1.88
HMGN1P10-201ENST00000474557 A0A0B4J293 547 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 ZC3H11AO75152 810 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 PPIFP30405 207 aaKnown RBP3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 ARRB2P32121 409 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 CYP2C19P33261 490 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 NOVP48745 357 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 ZNF280AP59817 542 aaPredicted RBP3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 SRSF2Q01130 221 aaKnown RBP3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 PPATQ06203 517 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 IZUMO4Q1ZYL8 232 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 RFX8Q6ZV50 586 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 ATG4AQ8WYN0 398 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 DNAJC28Q9NX36 388 aa3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 SIDT1Q9NXL6 827 aaKnown RBP3.27□□□□□ -1.89
HMGN1P10-201ENST00000474557 KIF20AO95235 890 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 MT-CO3P00414 261 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 GJB1P08034 283 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 FPR3P25089 353 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 COMPP49747 757 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 RBL2Q08999 1139 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 KRTAP24-1Q3LI83 254 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 RNASE12Q5GAN4 147 aaKnown RBP3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 RAB24Q969Q5 203 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 GATA5Q9BWX5 397 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 RBM38Q9H0Z9 239 aaKnown RBP3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 ASIC5Q9NY37 505 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 PCDHGB1Q9Y5G3 927 aa3.26□□□□□ -1.89
HMGN1P10-201ENST00000474557 COL2A1P02458 1487 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 SGTAO43765 313 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 CD63P08962 238 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 VEGFCP49767 419 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 E2F2Q14209 437 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 ARHGAP40Q5TG30 622 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 TMEM199Q8N511 208 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 ELP5Q8TE02 316 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 JPH3Q8WXH2 748 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 GPR35Q9HC97 309 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 CALCOCO1Q9P1Z2 691 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 AMFRQ9UKV5 643 aa3.25□□□□□ -1.89
HMGN1P10-201ENST00000474557 DENND3A2RUS2 1198 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 FGF2P09038 288 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 PKMP14618 531 aaKnown RBP3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 P2RX3P56373 397 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 SCAND1P57086 179 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 LOXL3P58215 753 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 DSCR9P59020 149 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 SP2Q02086 613 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 TCF15Q12870 199 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 VSTM1Q6UX27 236 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 RANBP10Q6VN20 620 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 RBM23Q86U06 439 aaKnown RBP3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 COL23A1Q86Y22 540 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 SIRT6Q8N6T7 355 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 LMO3Q8TAP4 145 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 NRG4Q8WWG1 115 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 SOCS4Q8WXH5 440 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 NINJ1Q92982 152 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 PTDSS2Q9BVG9 487 aa3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 TARS2Q9BW92 718 aaKnown RBP3.24□□□□□ -1.89
HMGN1P10-201ENST00000474557 TTBK1Q5TCY1 1321 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 AP4M1O00189 453 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 ZEB2O60315 1214 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 NDUFB8O95169 186 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 GNAI2P04899 355 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 RPLP2P05387 115 aaKnown RBP3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 ATXN1LP0C7T5 689 aaKnown RBP3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 RARBP10826 455 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 OSMP13725 252 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 GM2AP17900 193 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 WASP42768 502 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 PXNP49023 591 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 E2F1Q01094 437 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 DENND2CQ68D51 928 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 MORC1Q86VD1 984 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 EVPLQ92817 2033 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 HDAC10Q969S8 669 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 TM6SF1Q9BZW5 370 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 IFT22Q9H7X7 185 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 SSX2IPQ9Y2D8 614 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 CD2APQ9Y5K6 639 aa3.23□□□□□ -1.89
HMGN1P10-201ENST00000474557 FGAP02671 866 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 ACAA1P09110 424 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 POLD2P49005 469 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 TOB1P50616 345 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms