RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 ZNF517Q6ZMY9 492 aaPredicted RBP4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 KIAA0319LQ8IZA0 1049 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 PCSK9Q8NBP7 692 aaKnown RBP4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 C3orf20Q8ND61 904 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 SLC46A1Q96NT5 459 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 DDX21Q9NR30 783 aaKnown RBP eCLIP4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 KLHL13Q9P2N7 655 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 ABCF2Q9UG63 623 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 SSX2IPQ9Y2D8 614 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 FNDC1Q4ZHG4 1894 aaPredicted RBP4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 MYO1FO00160 1098 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 ZBED1O96006 694 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 KRT18P05783 430 aaKnown RBP4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 RAB1AP62820 205 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 NKX6-1P78426 367 aaPredicted RBP4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 TCF15Q12870 199 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 DAZAP2Q15038 168 aaPredicted RBP4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 ANO6Q4KMQ2 910 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 KLHL22Q53GT1 634 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 ICE2Q659A1 982 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 FCRL6Q6DN72 434 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 MIS18BP1Q6P0N0 1132 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 NPNTQ6UXI9 565 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 KSR2Q6VAB6 950 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 HEATR3Q7Z4Q2 680 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 PPP1R3BQ86XI6 285 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 C8orf58Q8NAV2 365 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 FAM156AQ8NDB6 213 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 R3HDM4Q96D70 268 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 CDK5RAP3Q96JB5 506 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 NT5C1BQ96P26 610 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 ASB2Q96Q27 587 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 SARGQ9BW04 601 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 FAM204AQ9H8W3 233 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 LMBRD1Q9NUN5 540 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 TUBA8Q9NY65 449 aaPredicted RBP4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 ADAMTS5Q9UNA0 930 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 POLHQ9Y253 713 aa4.46□□□□□ -1.7
TMEM50B-208ENST00000474272 SLC16A3O15427 465 aaKnown RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 MAP4K4O95819 1239 aaPredicted RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 HRGP04196 525 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 MYL1P05976 194 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 TRIM27P14373 513 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 TYRP14679 529 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 TKTP29401 623 aaKnown RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 POLGP54098 1239 aaPredicted RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 PLS1Q14651 629 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 TEDDM1Q5T9Z0 273 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 ARHGAP40Q5TG30 622 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 CRELD2Q6UXH1 353 aaPredicted RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 ZNF804AQ7Z570 1209 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 WDR53Q7Z5U6 358 aaPredicted RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 SRGAP1Q7Z6B7 1085 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 DAAM2Q86T65 1068 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 GALNT16Q8N428 558 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 XAGE5Q8WWM1 108 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 ATG4AQ8WYN0 398 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 GLG1Q92896 1179 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 HMCESQ96FZ2 354 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 SLC35A4Q96G79 324 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 RITA1Q96K30 269 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 BRIP1Q9BX63 1249 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 MRPL46Q9H2W6 279 aaKnown RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 STAP2Q9UGK3 403 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 CCNL1Q9UK58 526 aaPredicted RBP4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 L1RE1Q9UN81 338 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 AFG3L2Q9Y4W6 797 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 PCDHA1Q9Y5I3 950 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 WDR17Q8IZU2 1322 aa4.45□□□□□ -1.7
TMEM50B-208ENST00000474272 CYP2D7A0A087X1C5 515 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 A0A088AWK7 358 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 A1L4Q6 167 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 APAF1O14727 1248 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 TLR5O60602 858 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 EXOC3O60645 756 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 ARIH2O95376 493 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 GNAI2P04899 355 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 CCKBRP32239 447 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 LILRA4P59901 499 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 EXOSC9Q06265 439 aaKnown RBP4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 CCDC157Q569K6 752 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 PXDC1Q5TGL8 231 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 FAM160B1Q5W0V3 765 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 TRIM72Q6ZMU5 477 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 CCDC149Q6ZUS6 474 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 CCAR1Q8IX12 1150 aaKnown RBP4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 CELF5Q8N6W0 485 aaKnown RBP4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 NANOGP1Q8N7R0 232 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 NRACQ8N912 160 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 TTC17Q96AE7 1141 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 FAM167AQ96KS9 214 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 NELL2Q99435 816 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 SIK2Q9H0K1 926 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 ARMT1Q9H993 441 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 ZMAT3Q9HA38 289 aaKnown RBP4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 ATP6V0A4Q9HBG4 840 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 CHST12Q9NRB3 414 aa4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 TRNAU1APQ9NX07 287 aaKnown RBP4.44□□□□□ -1.7
TMEM50B-208ENST00000474272 MTMR4Q9NYA4 1195 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms