RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SHC4Q6S5L8 630 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 SPARTQ8N0X7 666 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ALLCQ8N6M5 410 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 CALML6Q8TD86 181 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 SSH3Q8TE77 659 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 TCEANC2Q96MN5 208 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ECSITQ9BQ95 431 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 DDX47Q9H0S4 455 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 SH2D4AQ9H788 454 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 AKTIPQ9H8T0 292 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 NLRC4Q9NPP4 1024 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ARHGEF4Q9NR80 690 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 CAPN11Q9UMQ6 739 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 UTP11Q9Y3A2 253 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 SQORQ9Y6N5 450 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 PKD1L3Q7Z443 1732 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 KIF20BQ96Q89 1820 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 PNMA6EA0A0J9YXQ4 647 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 LINC00854A0A1B0GVQ3 168 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 MACROD2A1Z1Q3 448 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 SMIM23A6NLE4 172 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 A8MXQ7 604 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 CENPBD1B2RD01 187 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 E9PMD0 336 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 AGRPO00253 132 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 SNX2O60749 519 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 B3GALNT1O75752 331 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 DCTN3O75935 186 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 CTDNEP1O95476 244 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 CYP1A2P05177 515 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 TGFB3P10600 412 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ECHS1P30084 290 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT6CP48668 564 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 AP3M2P53677 418 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 IGBP1P78318 339 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 XIAPP98170 497 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 DPYSQ14117 519 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 SPA17Q15506 151 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 PHKG1Q16816 387 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 KHDC1Q4VXA5 237 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ANKRD39Q53RE8 183 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 NBPF12Q5TAG4 269 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 DCAF15Q66K64 600 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 DENND2CQ68D51 928 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 NFRKBQ6P4R8 1299 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 CCDC62Q6P9F0 684 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 KLHDC10Q6PID8 442 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 PPP1R21Q6ZMI0 780 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 RBM44Q6ZP01 1051 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ANO5Q75V66 913 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 FASTKD5Q7L8L6 764 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 WAPLQ7Z5K2 1190 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 TMC3Q7Z5M5 1100 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 NET1Q7Z628 596 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 SATL1Q86VE3 508 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ERI1Q8IV48 349 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 LSMEM1Q8N8F7 131 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 SPATA20Q8TB22 786 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF775Q96BV0 537 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF512BQ96KM6 892 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 EGLN2Q96KS0 407 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 PSKH2Q96QS6 385 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 UQCC2Q9BRT2 126 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 HAUS8Q9BT25 410 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 IFIH1Q9BYX4 1025 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 PCDH12Q9NPG4 1184 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 FGFR1OP2Q9NVK5 253 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 DDX18Q9NVP1 670 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 MAP3K19Q56UN5 1328 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ZSCAN5CA6NGD5 496 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 GOLGA8BA8MQT2 603 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 AP3B1O00203 1094 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 CES2O00748 559 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 SH2B2O14492 632 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 RNF113AO15541 343 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 B4GALT4O60513 344 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 DKC1O60832 514 aaKnown RBP eCLIP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ESRRBO95718 433 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 OCM2P0CE71 109 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 OCMP0CE72 109 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 PTPN4P29074 926 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 PRCPP42785 496 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 MASP1P48740 699 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 COPB1P53618 953 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 COX10Q12887 443 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 TTF1Q15361 905 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 CNGA2Q16280 664 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 OSTM1Q86WC4 334 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 SAMD14Q8IZD0 417 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 PRPF31Q8WWY3 499 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 KISS1RQ969F8 398 aaPredicted RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 ERP44Q9BS26 406 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 TMEM109Q9BVC6 243 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 IMPG2Q9BZV3 1241 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 B3GNT4Q9C0J1 378 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 RBM38Q9H0Z9 239 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 IL1RAPL2Q9NP60 686 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 APEX2Q9UBZ4 518 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms