RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GINM1Q9NU53 330 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 ARL8BQ9NVJ2 186 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 ZFATQ9P243 1243 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 TM9SF1O15321 606 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 KHDC1Q4VXA5 237 aaKnown RBP22.09■■□□□ 1.13
COL18A1-207ENST00000473212 SH3PXD2AQ5TCZ1 1133 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 NPNTQ6UXI9 565 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 TEX9Q8N6V9 391 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 NIPA2Q8N8Q9 360 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 FAM71DQ8N9W8 422 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 FBXO41Q8TF61 875 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 XYLT2Q9H1B5 865 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 A6NHS1 94 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 ATP6V1C1P21283 382 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 ZNF280AP59817 542 aaPredicted RBP22.09■■□□□ 1.13
COL18A1-207ENST00000473212 TARBP2Q15633 366 aaKnown RBP22.09■■□□□ 1.13
COL18A1-207ENST00000473212 ZC3H12AQ5D1E8 599 aaKnown RBP22.09■■□□□ 1.13
COL18A1-207ENST00000473212 C4orf50Q6ZRC1 276 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 CATSPERGQ6ZRH7 1159 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 RNF149Q8NC42 400 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 PRR11Q96HE9 360 aaPredicted RBP22.09■■□□□ 1.13
COL18A1-207ENST00000473212 TWNKQ96RR1 684 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 TRIM55Q9BYV6 548 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 VPS11Q9H270 941 aa22.09■■□□□ 1.13
COL18A1-207ENST00000473212 METTL5Q9NRN9 209 aaKnown RBP22.09■■□□□ 1.13
COL18A1-207ENST00000473212 CSDE1O75534 798 aaKnown RBP22.08■■□□□ 1.13
COL18A1-207ENST00000473212 FARP2O94887 1054 aaPredicted RBP22.08■■□□□ 1.13
COL18A1-207ENST00000473212 HAUS5O94927 633 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 PDHA1P08559 390 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 SESN3P58005 492 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 MMRN1Q13201 1228 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 LY6KQ17RY6 165 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 ZNF699Q32M78 642 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 NAIF1Q69YI7 327 aaPredicted RBP22.08■■□□□ 1.13
COL18A1-207ENST00000473212 WDR49Q8IV35 697 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 LBHD1Q9BQE6 289 aaPredicted RBP22.08■■□□□ 1.13
COL18A1-207ENST00000473212 TSSK1BQ9BXA7 367 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 NIFKQ9BYG3 293 aaKnown RBP22.08■■□□□ 1.13
COL18A1-207ENST00000473212 DCLRE1BQ9H816 532 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 XPO7Q9UIA9 1087 aaKnown RBP22.08■■□□□ 1.13
COL18A1-207ENST00000473212 KCNG1Q9UIX4 513 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 CHMP2BQ9UQN3 213 aa22.08■■□□□ 1.13
COL18A1-207ENST00000473212 KRT19P08727 400 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 HOXC6P09630 235 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 LINGO3P0C6S8 592 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 KRT3P12035 628 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 PEX19P40855 299 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 TAP1Q03518 808 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 TRPC3Q13507 836 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 DSTYKQ6XUX3 929 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 APBB1IPQ7Z5R6 666 aaPredicted RBP22.08■■□□□ 1.12
COL18A1-207ENST00000473212 HSPH1Q92598 858 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 FBXO6Q9NRD1 293 aaPredicted RBP22.08■■□□□ 1.12
COL18A1-207ENST00000473212 DOCK1Q14185 1865 aa22.08■■□□□ 1.12
COL18A1-207ENST00000473212 E7ESA3 106 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 ABLIM1O14639 778 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 LPXNO60711 386 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 STAM2O75886 525 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 TCF7P36402 384 aaPredicted RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 ACO2Q99798 780 aaKnown RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 SDCBP2Q9H190 292 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 C2orf71A6NGG8 1288 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 HNRNPCL1O60812 293 aaKnown RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 CCDC22O60826 627 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 AVILO75366 819 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 TOM1L1O75674 476 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 MAP3K6O95382 1288 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 MT-ND3P03897 115 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 ERBB2P04626 1255 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 KDELR1P24390 212 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 SERPINB3P29508 390 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 GCLCP48506 637 aaPredicted RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 STAT5BP51692 787 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 ARFIP2P53365 341 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 PSMC1P62191 440 aaKnown RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 BASP1P80723 227 aaKnown RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 EEF1DP3Q658K8 133 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 DPH6Q7L8W6 267 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 POLNQ7Z5Q5 900 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 PDIK1LQ8N165 341 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 SH3TC2Q8TF17 1288 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 ALKBH8Q96BT7 664 aaKnown RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 PTCD3Q96EY7 689 aaKnown RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 BTBD10Q9BSF8 475 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 ASCC2Q9H1I8 757 aaPredicted RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 TMEM134Q9H6X4 195 aa22.07■■□□□ 1.12
COL18A1-207ENST00000473212 RPL26L1Q9UNX3 145 aaKnown RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 TNS1Q9HBL0 1735 aaKnown RBP22.07■■□□□ 1.12
COL18A1-207ENST00000473212 IGKV6D-21A0A0A0MT36 114 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 CHRM1P11229 460 aaPredicted RBP22.06■■□□□ 1.12
COL18A1-207ENST00000473212 GRIK3Q13003 919 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 DUOXA2Q1HG44 320 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 BBS12Q6ZW61 710 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 DNAJC9Q8WXX5 260 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 SERAC1Q96JX3 654 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 ZNF518BQ9C0D4 1074 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 KCNK13Q9HB14 408 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 NFKBIEO00221 500 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 NEFHP12036 1026 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 OAZ1P54368 228 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms