RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 NELL2Q99435 816 aa21.13■□□□□ 0.97
UBQLN4-203ENST00000472638 MED10Q9BTT4 135 aa21.13■□□□□ 0.97
UBQLN4-203ENST00000472638 ELOVL4Q9GZR5 314 aa21.13■□□□□ 0.97
UBQLN4-203ENST00000472638 TSPY26PQ9H489 355 aa21.13■□□□□ 0.97
UBQLN4-203ENST00000472638 TMEM30AQ9NV96 361 aa21.13■□□□□ 0.97
UBQLN4-203ENST00000472638 SPATA6Q9NWH7 488 aaPredicted RBP21.13■□□□□ 0.97
UBQLN4-203ENST00000472638 HMGXB4Q9UGU5 601 aa21.13■□□□□ 0.97
UBQLN4-203ENST00000472638 MRPS17Q9Y2R5 130 aaKnown RBP21.13■□□□□ 0.97
UBQLN4-203ENST00000472638 MAN2B1O00754 1011 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 EPB41P11171 864 aaKnown RBP21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 CCNE1P24864 410 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 ASPAP45381 313 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 NDST1P52848 882 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 TNK2Q07912 1038 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 ANKRD40Q6AI12 368 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 FRMD5Q7Z6J6 570 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 C1orf210Q8IVY1 113 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 ADSSL1Q8N142 457 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 TNIP3Q96KP6 325 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 C8orf48Q96LL4 319 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 SLC22A12Q96S37 553 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 TSG101Q99816 390 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 OSBPL6Q9BZF3 934 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 APOBEC3GQ9HC16 384 aaKnown RBP21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 TDP1Q9NUW8 608 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 THG1LQ9NWX6 298 aaKnown RBP21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 GTSE1Q9NYZ3 720 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 ZMYM5Q9UJ78 669 aa21.12■□□□□ 0.97
UBQLN4-203ENST00000472638 C2orf78A6NCI8 922 aa21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 TRIM49BA6NDI0 452 aa21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 ANO6Q4KMQ2 910 aa21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 C11orf57Q6ZUT1 292 aaPredicted RBP21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 FAM35AQ86V20 835 aa21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 ARL14EPQ8N8R7 260 aaPredicted RBP21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 RIN3Q8TB24 985 aa21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 IMPG2Q9BZV3 1241 aa21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 NAT10Q9H0A0 1025 aaKnown RBP21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 TMEM8AQ9HCN3 771 aa21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 GKN1Q9NS71 199 aa21.11■□□□□ 0.97
UBQLN4-203ENST00000472638 COL4A2P08572 1712 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 TICRRQ7Z2Z1 1910 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 TRAV19A0A0A6YYK7 116 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 PPP1R3GB7ZBB8 358 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 PSMA7O14818 248 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 NCAM2O15394 837 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 CKMP06732 381 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 CCDC130P13994 396 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 NOP14P78316 857 aaKnown RBP21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 FZD5Q13467 585 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 TRIM68Q6AZZ1 485 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 PAQR9Q6ZVX9 377 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 DHTKD1Q96HY7 919 aaPredicted RBP21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 KCNK16Q96T55 309 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 BPIFA3Q9BQP9 254 aa21.1■□□□□ 0.97
UBQLN4-203ENST00000472638 NUP210Q8TEM1 1887 aaPredicted RBP21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 ATP8B3O60423 1300 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 ABL1P00519 1130 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 USP17L7P0C7H9 530 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 CD44P16070 742 aaKnown RBP21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 CD58P19256 250 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 ERCC5P28715 1186 aaPredicted RBP21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 NBL1P41271 181 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 PLCB2Q00722 1185 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 DCAF17Q5H9S7 520 aaPredicted RBP21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 TCERG1LQ5VWI1 586 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 KRT39Q6A163 491 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 FOXR2Q6PJQ5 311 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 SEMA4DQ92854 862 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 CLDN23Q96B33 292 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 CEP295NLQ96MC4 621 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 C8orf33Q9H7E9 229 aaPredicted RBP21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 KIF9Q9HAQ2 790 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 FAM49BQ9NUQ9 324 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 TRPM5Q9NZQ8 1165 aa21.09■□□□□ 0.97
UBQLN4-203ENST00000472638 CACNA1HO95180 2353 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 SOBPA7XYQ1 873 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 SPECC1L-ADORA2AF8WAN1 911 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 LAMTOR5O43504 91 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 AP1G2O75843 785 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 HDCP19113 662 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 GTF2H1P32780 548 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 MXI1P50539 228 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 FKBP3Q00688 224 aaKnown RBP21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 ENPEPQ07075 957 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 PAK1Q13153 545 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 KLHL10Q6JEL2 608 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 CC2D1AQ6P1N0 951 aaPredicted RBP21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 TXNDC11Q6PKC3 985 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 FUKQ8N0W3 1084 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 ZNF687Q8N1G0 1237 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 C12orf29Q8N999 325 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 CCDC150Q8NCX0 1101 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 TWNKQ96RR1 684 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 TTLL2Q9BWV7 592 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 NIF3L1Q9GZT8 377 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 EBF3Q9H4W6 596 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 LMAN1LQ9HAT1 526 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 KRT82Q9NSB4 513 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 EHD2Q9NZN4 543 aa21.08■□□□□ 0.97
UBQLN4-203ENST00000472638 GCNT4Q9P109 453 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms