RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 AGAP1Q9UPQ3 857 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 MTF2Q9Y483 593 aaPredicted RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 PROB1E7EW31 1015 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 PHACTR2O75167 634 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 SOAT2O75908 522 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 C4BPAP04003 597 aaKnown RBP9.78□□□□□ -0.84
SMC4-213ENST00000472282 MYL4P12829 197 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 CD72P21854 359 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 NBL1P41271 181 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 GCLMP48507 274 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 AP3M2P53677 418 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 STARD6P59095 220 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 LILRA4P59901 499 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 CLDN10P78369 228 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 RBP5P82980 135 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 ENPEPQ07075 957 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 PPP3CAQ08209 521 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 GRM2Q14416 872 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 ZSCAN23Q3MJ62 389 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 ZACNQ401N2 412 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 SV2CQ496J9 727 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 ANO6Q4KMQ2 910 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 CT47A1Q5JQC4 288 aaPredicted RBP9.78□□□□□ -0.84
SMC4-213ENST00000472282 FAM78AQ5JUQ0 283 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 MTSS1LQ765P7 747 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 RTL10Q7L3V2 364 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 APPL2Q8NEU8 664 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 OR10T2Q8NGX3 314 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 SENP8Q96LD8 212 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 CNOT6LQ96LI5 555 aaKnown RBP9.78□□□□□ -0.84
SMC4-213ENST00000472282 FUCA2Q9BTY2 467 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
SMC4-213ENST00000472282 R3HCC1Q9Y3T6 440 aaKnown RBP9.78□□□□□ -0.84
SMC4-213ENST00000472282 YIPF1Q9Y548 306 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 HELZP42694 1942 aaKnown RBP9.78□□□□□ -0.84
SMC4-213ENST00000472282 CACNA1HO95180 2353 aa9.78□□□□□ -0.84
SMC4-213ENST00000472282 MYO16Q9Y6X6 1858 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 MTMR11A4FU01 709 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 PRR23AA6NEV1 266 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 IKBKBO14920 756 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 ECI2O75521 394 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 CLSTN1O94985 981 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 LETM1O95202 739 aaPredicted RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 VNN1O95497 513 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 FGFR1OPO95684 399 aaKnown RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 GNA14O95837 355 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 CCDC192P0DO97 292 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 TYMPP19971 482 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 PNPLA4P41247 253 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 PIK3CAP42336 1068 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 MXI1P50539 228 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 EPHA5P54756 1037 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 MARSP56192 900 aaKnown RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 MCCD1P59942 119 aaPredicted RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 MYL6P60660 151 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 DUSP4Q13115 394 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 GPR17Q13304 367 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 TRPC3Q13507 836 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 TEAD2Q15562 447 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 MLF2Q15773 248 aaPredicted RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 SLC44A4Q53GD3 710 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 HSP90AA4PQ58FG1 418 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 STXBP5Q5T5C0 1151 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 OVOS1Q6IE37 1185 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 PDZD4Q76G19 769 aaPredicted RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 TMC8Q8IU68 726 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 LRRC52Q8N7C0 313 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 ATAD1Q8NBU5 361 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 PJA1Q8NG27 643 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 SHKBP1Q8TBC3 707 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 SLC35C1Q96A29 364 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 RSPRY1Q96DX4 576 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 KCTD15Q96SI1 283 aaPredicted RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 DDX23Q9BUQ8 820 aaKnown RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 TMEM8AQ9HCN3 771 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 ZNF334Q9HCZ1 680 aaPredicted RBP9.77□□□□□ -0.85
SMC4-213ENST00000472282 SIT1Q9Y3P8 196 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 NFE2L3Q9Y4A8 694 aa9.77□□□□□ -0.85
SMC4-213ENST00000472282 KPNA7A9QM74 516 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 STX10O60499 249 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 HLA-DRAP01903 254 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 ODC1P11926 461 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 RFX1P22670 979 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 PAX3P23760 479 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 VIPR2P41587 438 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 PTK2Q05397 1052 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 MYO1EQ12965 1108 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 NCOA4Q13772 614 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 ZNF699Q32M78 642 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 CBWD6Q4V339 395 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 CBWD3Q5JTY5 395 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 CBWD5Q5RIA9 395 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 KRT39Q6A163 491 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 VITQ6UXI7 678 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 Q6ZVU0 165 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 LRRTM3Q86VH5 581 aa9.76□□□□□ -0.85
SMC4-213ENST00000472282 IRF2BP1Q8IU81 584 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms