RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 SMG9Q9H0W8 520 aaKnown RBP9.72□□□□□ -0.85
SYN3-211ENST00000472027 KCNH6Q9H252 994 aa9.72□□□□□ -0.85
SYN3-211ENST00000472027 CISHQ9NSE2 258 aa9.72□□□□□ -0.85
SYN3-211ENST00000472027 FAM49BQ9NUQ9 324 aa9.72□□□□□ -0.85
SYN3-211ENST00000472027 OBP2AQ9NY56 170 aa9.72□□□□□ -0.85
SYN3-211ENST00000472027 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
SYN3-211ENST00000472027 TECTAO75443 2155 aa9.72□□□□□ -0.85
SYN3-211ENST00000472027 ATP8B3O60423 1300 aa9.72□□□□□ -0.85
SYN3-211ENST00000472027 GOLGA6L22H0YM25 854 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 TNFRSF10BO14763 440 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 CHADO15335 359 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 P4HA2O15460 535 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 AP1G2O75843 785 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 PRAMEF12O95522 483 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 CCDC192P0DO97 292 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 RFX1P22670 979 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 YWHAQP27348 245 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 AVPR1AP37288 418 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 PPP3CCP48454 512 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 MAP3K7CLP57077 242 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 PRKCQQ04759 706 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 FCHO2Q0JRZ9 810 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 CETN1Q12798 172 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 LRMPQ12912 555 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 TAF10Q12962 218 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 CREBRFQ8IUR6 639 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 TTC39CQ8N584 583 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 CELF5Q8N6W0 485 aaKnown RBP9.71□□□□□ -0.86
SYN3-211ENST00000472027 ZMIZ2Q8NF64 920 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 DNASE1L2Q92874 299 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 USP13Q92995 863 aaPredicted RBP9.71□□□□□ -0.86
SYN3-211ENST00000472027 TMEM176AQ96HP8 235 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 HEXIM2Q96MH2 286 aaKnown RBP9.71□□□□□ -0.86
SYN3-211ENST00000472027 SLC22A12Q96S37 553 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 SMOQ99835 787 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 ARID3AQ99856 593 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 DNAI2Q9GZS0 605 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 FAM124BQ9H5Z6 455 aaPredicted RBP9.71□□□□□ -0.86
SYN3-211ENST00000472027 TBC1D17Q9HA65 648 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 CSNK1G1Q9HCP0 422 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 TRPC7Q9HCX4 862 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 DMAP1Q9NPF5 467 aaPredicted RBP9.71□□□□□ -0.86
SYN3-211ENST00000472027 TRPV5Q9NQA5 729 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 HEBP1Q9NRV9 189 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 KRT82Q9NSB4 513 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 TDP1Q9NUW8 608 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 TRPM5Q9NZQ8 1165 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 CCL26Q9Y258 94 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 SIT1Q9Y3P8 196 aa9.71□□□□□ -0.86
SYN3-211ENST00000472027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.71□□□□□ -0.86
SYN3-211ENST00000472027 TRAV19A0A0A6YYK7 116 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 KANSL1LA0AUZ9 987 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 C2orf78A6NCI8 922 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 ZNF840PA6NDX5 716 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 ARNTLO00327 626 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 RTN3O95197 1032 aaPredicted RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 ABL1P00519 1130 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 AFPP02771 609 aaKnown RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 USP17L7P0C7H9 530 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 HDCP19113 662 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 CD72P21854 359 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 ADORA2BP29275 332 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 SLC5A3P53794 718 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 RAD23BP54727 409 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 IFRD2Q12894 506 aaPredicted RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 CUL2Q13617 745 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 TPD52L1Q16890 204 aaPredicted RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 DPCR1Q3MIW9 517 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 ARHGAP29Q52LW3 1261 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 TPRG1Q6ZUI0 275 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 ARL14EPQ8N8R7 260 aaPredicted RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 SLC4A11Q8NBS3 891 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 EHBP1Q8NDI1 1231 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 SCAMP5Q8TAC9 235 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 LMO3Q8TAP4 145 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 CSGALNACT1Q8TDX6 532 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 ZFYVE19Q96K21 471 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 SLITRK1Q96PX8 696 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 PRRX2Q99811 253 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 DDX23Q9BUQ8 820 aaKnown RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 FOXQ1Q9C009 403 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 GKN1Q9NS71 199 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 THG1LQ9NWX6 298 aaKnown RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 COMMD8Q9NX08 183 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 IL37Q9NZH6 218 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 GCNT4Q9P109 453 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 CHORDC1Q9UHD1 332 aaPredicted RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 DACH1Q9UI36 760 aa9.7□□□□□ -0.86
SYN3-211ENST00000472027 MTF2Q9Y483 593 aaPredicted RBP9.7□□□□□ -0.86
SYN3-211ENST00000472027 SHISA7A6NL88 538 aa9.69□□□□□ -0.86
SYN3-211ENST00000472027 FAM170BA6NMN3 283 aa9.69□□□□□ -0.86
SYN3-211ENST00000472027 CKMP06732 381 aa9.69□□□□□ -0.86
SYN3-211ENST00000472027 DCNP07585 359 aaKnown RBP9.69□□□□□ -0.86
SYN3-211ENST00000472027 FAM200BP0CF97 657 aa9.69□□□□□ -0.86
SYN3-211ENST00000472027 PFKLP17858 780 aa9.69□□□□□ -0.86
SYN3-211ENST00000472027 TBXAS1P24557 533 aaPredicted RBP9.69□□□□□ -0.86
SYN3-211ENST00000472027 ERCC5P28715 1186 aaPredicted RBP9.69□□□□□ -0.86
SYN3-211ENST00000472027 NUBP1P53384 320 aa9.69□□□□□ -0.86
SYN3-211ENST00000472027 YWHAEP62258 255 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms