RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MAN2B1O00754 1011 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 CD58P19256 250 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 BMP6P22004 513 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 USP46P62068 366 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 CCDC40Q4G0X9 1142 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 WDR44Q5JSH3 913 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 FAM35AQ86V20 835 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 CRYBG2Q8N1P7 616 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 TTC8Q8TAM2 541 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 SEMA4DQ92854 862 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 USP13Q92995 863 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-218ENST00000470942 CYP3A43Q9HB55 503 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 TDP1Q9NUW8 608 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 RAB20Q9NX57 234 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 HMGXB4Q9UGU5 601 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 CTNND2Q9UQB3 1225 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 CCL26Q9Y258 94 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 MRPS17Q9Y2R5 130 aaKnown RBP16.68■□□□□ 0.26
HDAC6-218ENST00000470942 PIAS3Q9Y6X2 628 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 TRAV19A0A0A6YYK7 116 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 BICDL2A1A5D9 508 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 AP1G2O75843 785 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 ABL1P00519 1130 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 CKMP06732 381 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 USP17L7P0C7H9 530 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 CCDC130P13994 396 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 KPNA1P52294 538 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-218ENST00000470942 STX17P56962 302 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 PAQR9Q6ZVX9 377 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 FILIP1Q7Z7B0 1213 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 NUP93Q8N1F7 819 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 TTC16Q8NEE8 873 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 SLC2A14Q8TDB8 520 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 SMARCD1Q96GM5 515 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 CYP2S1Q96SQ9 504 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 KCNK16Q96T55 309 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 NELL2Q99435 816 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 NT5C1AQ9BXI3 368 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 DNAI2Q9GZS0 605 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 KIF9Q9HAQ2 790 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 METTL14Q9HCE5 456 aaKnown RBP16.67■□□□□ 0.26
HDAC6-218ENST00000470942 FAM49BQ9NUQ9 324 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 TMEM30AQ9NV96 361 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 FAM86C1Q9NVL1 165 aa16.67■□□□□ 0.26
HDAC6-218ENST00000470942 NDRG2Q9UN36 371 aaKnown RBP16.67■□□□□ 0.26
HDAC6-218ENST00000470942 C2orf78A6NCI8 922 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 ARNTLO00327 626 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 NCAM2O15394 837 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 GLULP15104 373 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 TARSP26639 723 aaKnown RBP16.66■□□□□ 0.26
HDAC6-218ENST00000470942 ADORA2BP29275 332 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 INCA1Q0VD86 236 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 TAF10Q12962 218 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 ANGPT1Q15389 498 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 CC2D1AQ6P1N0 951 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-218ENST00000470942 FRMD5Q7Z6J6 570 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 FUKQ8N0W3 1084 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 ARL14EPQ8N8R7 260 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-218ENST00000470942 C12orf29Q8N999 325 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 FAM3CQ92520 227 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 SLITRK1Q96PX8 696 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 TWNKQ96RR1 684 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 SLC22A12Q96S37 553 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 DUSP9Q99956 384 aaKnown RBP16.66■□□□□ 0.26
HDAC6-218ENST00000470942 TTLL2Q9BWV7 592 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 OSBPL6Q9BZF3 934 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 DMAP1Q9NPF5 467 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-218ENST00000470942 KRT82Q9NSB4 513 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 DLGAP2Q9P1A6 1054 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 F5P12259 2224 aa16.66■□□□□ 0.26
HDAC6-218ENST00000470942 HELZP42694 1942 aaKnown RBP16.66■□□□□ 0.26
HDAC6-218ENST00000470942 CILPO75339 1184 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 RTN3O95197 1032 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-218ENST00000470942 HDCP19113 662 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 YWHAQP27348 245 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 SOX9P48436 509 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 PPP3CCP48454 512 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 PAK1Q13153 545 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 ZNF268Q14587 947 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-218ENST00000470942 TTI2Q6NXR4 508 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 TATDN2Q93075 761 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 SLC35C1Q96A29 364 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 C8orf33Q9H7E9 229 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-218ENST00000470942 GKN1Q9NS71 199 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 GTSE1Q9NYZ3 720 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 CACNA1HO95180 2353 aa16.65■□□□□ 0.26
HDAC6-218ENST00000470942 ZNF840PA6NDX5 716 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 SHISA7A6NL88 538 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 PDE6CP51160 858 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 MAP3K7CLP57077 242 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 TNK2Q07912 1038 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 ZNF394Q53GI3 561 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 ALYREFQ86V81 257 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms