RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 TMEM30AQ9NV96 361 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 TMLHEQ9NVH6 421 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 SALL4Q9UJQ4 1053 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 PCDHB12Q9Y5F1 795 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 PATJQ8NI35 1801 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 FGF18O76093 207 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 ABLIM3O94929 683 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 ARHGEF15O94989 841 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 ABL1P00519 1130 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CTSAP10619 480 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CCDC130P13994 396 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 NPR3P17342 541 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 ACAT1P24752 427 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 PSMC1P62191 440 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 GPC5P78333 572 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 TSPY1Q01534 308 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 BST2Q10589 180 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 PDCLQ13371 301 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 RAB33AQ14088 237 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 GOLGA7BQ2TAP0 167 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 PTPN20Q4JDL3 420 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 MDH1BQ5I0G3 518 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 NAA35Q5VZE5 725 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 TPGS2Q68CL5 300 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 FAM109BQ6ICB4 259 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 FAM117BQ6P1L5 589 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 VSTM1Q6UX27 236 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CLEC20AQ6ZU45 233 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 ARCQ7LC44 396 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 FAM35AQ86V20 835 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 DCP1BQ8IZD4 617 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 ZMIZ2Q8NF64 920 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 SLC2A14Q8TDB8 520 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 RFFLQ8WZ73 363 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 MYLPFQ96A32 169 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 MCRS1Q96EZ8 462 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 TMEM169Q96HH4 297 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 RNPC3Q96LT9 517 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 TMEM209Q96SK2 561 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 SMOQ99835 787 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CLSTN3Q9BQT9 956 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 IL37Q9NZH6 218 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 MYO1AQ9UBC5 1043 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CEP83Q9Y592 693 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 M0QYV0 167 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 FSCN2O14926 492 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 KRT86O43790 486 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 PAPLNO95428 1278 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 TUBB4AP04350 444 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CALB1P05937 261 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 NSFP46459 744 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 GLUD2P49448 558 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CREMQ03060 361 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 TAP1Q03518 808 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 PDE4CQ08493 712 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 KIF5AQ12840 1032 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 ZNF268Q14587 947 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CTXN3Q4LDR2 81 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 PMF1Q6P1K2 205 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 C4orf50Q6ZRC1 276 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 SLFN11Q7Z7L1 901 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 KLHL23Q8NBE8 558 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 C3orf20Q8ND61 904 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 C1orf131Q8NDD1 294 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 SPPL3Q8TCT6 385 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 SPPL2BQ8TCT7 592 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CPA5Q8WXQ8 436 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 SECISBP2LQ93073 1101 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 ARHGEF26Q96DR7 871 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 SMARCD1Q96GM5 515 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 C8orf48Q96LL4 319 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CPXM1Q96SM3 734 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 MIS12Q9H081 205 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 FAM49BQ9NUQ9 324 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 CHD7Q9P2D1 2997 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 WDR35Q9P2L0 1181 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 UVRAGQ9P2Y5 699 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 HESX1Q9UBX0 185 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 PUF60Q9UHX1 559 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 SSX2IPQ9Y2D8 614 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 YBX2Q9Y2T7 364 aaKnown RBP8.62□□□□□ -1.03
NPHP3-204ENST00000469232 PCDHGC5Q9Y5F6 944 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 USP3Q9Y6I4 520 aa8.62□□□□□ -1.03
NPHP3-204ENST00000469232 LAMA2P24043 3122 aaKnown RBP8.61□□□□□ -1.03
NPHP3-204ENST00000469232 GBF1Q92538 1859 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 PLXNA4Q9HCM2 1894 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-204ENST00000469232 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-204ENST00000469232 FAM92AA1XBS5 289 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 TULP2O00295 520 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 TNFRSF10BO14763 440 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 ADAM12O43184 909 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 CLSTN1O94985 981 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 FAM200BP0CF97 657 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 ACADSBP45954 432 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 CACNA2D1P54289 1103 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 KRT17Q04695 432 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 CAMK1Q14012 370 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms