RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 IL1R2P27930 398 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 HALP42357 657 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 STARD3Q14849 445 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 IQCB1Q15051 598 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 CYP2A13Q16696 494 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 C4orf46Q504U0 113 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 FOXR2Q6PJQ5 311 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.09□□□□□ -1.43
LSM5-209ENST00000468872 RD3Q7Z3Z2 195 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 GAS2L3Q86XJ1 694 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 YAF2Q8IY57 180 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 VGLL2Q8N8G2 317 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 Q8NA96 180 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 POC1BQ8TC44 478 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 SMOC2Q9H3U7 446 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 ALG13Q9NP73 1137 aaKnown RBP6.09□□□□□ -1.43
LSM5-209ENST00000468872 TBCCD1Q9NVR7 557 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 HDAC9Q9UKV0 1011 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 COX11Q9Y6N1 276 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 MORC2Q9Y6X9 1032 aaPredicted RBP6.09□□□□□ -1.43
LSM5-209ENST00000468872 A0A087WZ62 844 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 MASP2O00187 686 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 SUN1O94901 812 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 CYP2C9P11712 490 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 XRCC6P12956 609 aaKnown RBP eCLIP6.08□□□□□ -1.44
LSM5-209ENST00000468872 BTF3P20290 206 aaKnown RBP6.08□□□□□ -1.44
LSM5-209ENST00000468872 ACVR2AP27037 513 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 CHKAP35790 457 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 ALDH9A1P49189 494 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 ZNF134P52741 427 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 MRPS21P82921 87 aaKnown RBP6.08□□□□□ -1.44
LSM5-209ENST00000468872 MC2RQ01718 297 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 PLA1AQ53H76 456 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 Q6ZNX1 250 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 TMPRSS9Q7Z410 1059 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 ANKRD42Q8N9B4 389 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 ZNF527Q8NB42 609 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 LRRC46Q96FV0 321 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 MOGAT1Q96PD6 335 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 MED15Q96RN5 788 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 HEPHQ9BQS7 1158 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 HERPUD2Q9BSE4 406 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 CASS4Q9NQ75 786 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 XPNPEP3Q9NQH7 507 aa6.08□□□□□ -1.44
LSM5-209ENST00000468872 MTO1Q9Y2Z2 717 aaKnown RBP6.08□□□□□ -1.44
LSM5-209ENST00000468872 LOC102723971A0A1B0GUV8 181 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 FAM234BA2RU67 622 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 H7C4K7 107 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 RAB27BO00194 218 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 FFAR2O15552 330 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 ZFPL1O95159 310 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 NDST3O95803 873 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 ATXN1LP0C7T5 689 aaKnown RBP6.07□□□□□ -1.44
LSM5-209ENST00000468872 MYL4P12829 197 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 KCNA2P16389 499 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 GCLCP48506 637 aaPredicted RBP6.07□□□□□ -1.44
LSM5-209ENST00000468872 PTH2RP49190 550 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 LILRA4P59901 499 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 PUM3Q15397 648 aaKnown RBP6.07□□□□□ -1.44
LSM5-209ENST00000468872 ELF2Q15723 593 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 ZIK1Q3SY52 487 aaPredicted RBP6.07□□□□□ -1.44
LSM5-209ENST00000468872 FCRL6Q6DN72 434 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 FBXO42Q6P3S6 717 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 SYCE2Q6PIF2 218 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 ZNF280BQ86YH2 543 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 NKAPQ8N5F7 415 aaKnown RBP6.07□□□□□ -1.44
LSM5-209ENST00000468872 IPCEF1Q8WWN9 437 aaPredicted RBP6.07□□□□□ -1.44
LSM5-209ENST00000468872 PPP1R9BQ96SB3 815 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 UNKLQ9H9P5 680 aaKnown RBP6.07□□□□□ -1.44
LSM5-209ENST00000468872 SLC39A10Q9ULF5 831 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 MAGED2Q9UNF1 606 aaPredicted RBP6.07□□□□□ -1.44
LSM5-209ENST00000468872 RAD54BQ9Y620 910 aa6.07□□□□□ -1.44
LSM5-209ENST00000468872 SPATA31A6Q5VVP1 1343 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 MYADML2A6NDP7 307 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 ERN1O75460 977 aaKnown RBP6.06□□□□□ -1.44
LSM5-209ENST00000468872 GABRB3P28472 473 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 PDIA3P30101 505 aaKnown RBP6.06□□□□□ -1.44
LSM5-209ENST00000468872 VAV2P52735 878 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 ICA1Q05084 483 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 GALNT1Q10472 559 aaPredicted RBP6.06□□□□□ -1.44
LSM5-209ENST00000468872 SLC29A2Q14542 456 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 NPY5RQ15761 445 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 PGBD2Q6P3X8 592 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 GGT6Q6P531 493 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 KRT28Q7Z3Y7 464 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 GLIS1Q8NBF1 620 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 FAM98AQ8NCA5 519 aaKnown RBP6.06□□□□□ -1.44
LSM5-209ENST00000468872 CYP2W1Q8TAV3 490 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 CAGE1Q8TC20 777 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 PTCD3Q96EY7 689 aaKnown RBP6.06□□□□□ -1.44
LSM5-209ENST00000468872 EIF2AQ9BY44 585 aaKnown RBP6.06□□□□□ -1.44
LSM5-209ENST00000468872 MAGEB5Q9BZ81 275 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 TLK1Q9UKI8 766 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 CAPN11Q9UMQ6 739 aa6.06□□□□□ -1.44
LSM5-209ENST00000468872 PODXLO00592 558 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 TOR1BO14657 336 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 HNRNPDLO14979 420 aaKnown RBP6.05□□□□□ -1.44
LSM5-209ENST00000468872 CCP110O43303 1012 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 CD38P28907 300 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 CPT1AP50416 773 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms