RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CSH1P0DML2 217 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 CSH2P0DML3 217 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 KRT13P13646 458 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 PTPN1P18031 435 aaKnown RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 GABRR2P28476 465 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 AVPR2P30518 371 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 GPR15P49685 360 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 CDH8P55286 799 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 PSMC1P62191 440 aaKnown RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 RPL10AP62906 217 aaKnown RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 CRTC2Q53ET0 693 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 CWF19L1Q69YN2 538 aaKnown RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 C4orf50Q6ZRC1 276 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 SPATA2LQ8IUW3 424 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 SUGP1Q8IWZ8 645 aaKnown RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 OR6B3Q8NGW1 331 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 ZSCAN18Q8TBC5 510 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 ADAM32Q8TC27 787 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 GPR152Q8TDT2 470 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 TAS1R2Q8TE23 839 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 GIPC2Q8TF65 315 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 MYLPFQ96A32 169 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 EEF2KMTQ96G04 330 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 TRMT2BQ96GJ1 504 aaKnown RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 KXD1Q9BQD3 176 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 SNX25Q9H3E2 840 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 TASP1Q9H6P5 420 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 TMEM8AQ9HCN3 771 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 ZMYM5Q9UJ78 669 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 HCN4Q9Y3Q4 1203 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 ANAPC1Q9H1A4 1944 aa11.89□□□□□ -0.51
COL4A6-205ENST00000468338 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-205ENST00000468338 ZNF638Q14966 1978 aaKnown RBP11.88□□□□□ -0.51
COL4A6-205ENST00000468338 NCANO14594 1321 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 TRIM49BA6NDI0 452 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 PSMA7O14818 248 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 EPB41P11171 864 aaKnown RBP11.88□□□□□ -0.51
COL4A6-205ENST00000468338 CDC25CP30307 473 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 ASPAP45381 313 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 GCLMP48507 274 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 VCPP55072 806 aaKnown RBP11.88□□□□□ -0.51
COL4A6-205ENST00000468338 NLRP12P59046 1061 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 STARD6P59095 220 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 DDR2Q16832 855 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 STXBP5Q5T5C0 1151 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 KRT39Q6A163 491 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 PHLDB3Q6NSJ2 640 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 TTI2Q6NXR4 508 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 VITQ6UXI7 678 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 ARID3BQ8IVW6 561 aaPredicted RBP11.88□□□□□ -0.51
COL4A6-205ENST00000468338 CRYBG2Q8N1P7 616 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 TRIML1Q8N9V2 468 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 B3GALNT2Q8NCR0 500 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 E2F7Q96AV8 911 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 ELMO3Q96BJ8 720 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 RSPRY1Q96DX4 576 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 FAXDC2Q96IV6 333 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 SPATA17Q96L03 361 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 TSG101Q99816 390 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 DUSP9Q99956 384 aaKnown RBP11.88□□□□□ -0.51
COL4A6-205ENST00000468338 DDX23Q9BUQ8 820 aaKnown RBP11.88□□□□□ -0.51
COL4A6-205ENST00000468338 BCO2Q9BYV7 579 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 ATXN3LQ9H3M9 355 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 DPEP3Q9H4B8 488 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 SMYD3Q9H7B4 428 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 APOBEC3GQ9HC16 384 aaKnown RBP11.88□□□□□ -0.51
COL4A6-205ENST00000468338 TRPV5Q9NQA5 729 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 TMEM30AQ9NV96 361 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 OBP2AQ9NY56 170 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 MAGEC2Q9UBF1 373 aaPredicted RBP11.88□□□□□ -0.51
COL4A6-205ENST00000468338 COQ4Q9Y3A0 265 aa11.88□□□□□ -0.51
COL4A6-205ENST00000468338 SHISA7A6NL88 538 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 SLC38A8A6NNN8 435 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 A8MXQ7 604 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 ARNTLO00327 626 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 LRRN2O75325 713 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 TADA3O75528 432 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 P4HA1P13674 534 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 PSMC3P17980 439 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 AOC1P19801 751 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 BDNFP23560 247 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 RAP1GAPP47736 663 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 NOP14P78316 857 aaKnown RBP11.87□□□□□ -0.51
COL4A6-205ENST00000468338 PFKPQ01813 784 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 FCHO2Q0JRZ9 810 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 INCA1Q0VD86 236 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 STIM1Q13586 685 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 MDH1BQ5I0G3 518 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 SDHAF4Q5VUM1 108 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 ISM2Q6H9L7 571 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 SPOPLQ6IQ16 392 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 PAQR9Q6ZVX9 377 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 FILIP1Q7Z7B0 1213 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 UNC93AQ86WB7 457 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 ANKMY2Q8IV38 441 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 MFSD6LQ8IWD5 586 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 SIX5Q8N196 739 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 TMEM105Q8N8V8 129 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 DEPDC1BQ8WUY9 529 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 SEMA4DQ92854 862 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms