RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ASPAP45381 313 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 KPNA1P52294 538 aaPredicted RBP18.19■□□□□ 0.5
SSBP1-207ENST00000468267 CACNA2D1P54289 1103 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 USP46P62068 366 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 NOP14P78316 857 aaKnown RBP18.19■□□□□ 0.5
SSBP1-207ENST00000468267 FANCMQ8IYD8 2048 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 ADSSL1Q8N142 457 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 TAS1R2Q8TE23 839 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 FAM3CQ92520 227 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 MSANTD3Q96H12 275 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 TSG101Q99816 390 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 KIF9Q9HAQ2 790 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 TMEM8AQ9HCN3 771 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 NDRG2Q9UN36 371 aaKnown RBP18.19■□□□□ 0.5
SSBP1-207ENST00000468267 EP300Q09472 2414 aaPredicted RBP18.18■□□□□ 0.5
SSBP1-207ENST00000468267 TRAV19A0A0A6YYK7 116 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 KINO60870 393 aaKnown RBP18.18■□□□□ 0.5
SSBP1-207ENST00000468267 EPB41P11171 864 aaKnown RBP18.18■□□□□ 0.5
SSBP1-207ENST00000468267 ANKRD40Q6AI12 368 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 C1orf228Q6PIY5 440 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 PAQR9Q6ZVX9 377 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 FRMD5Q7Z6J6 570 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 ACOT1Q86TX2 421 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 UNC93AQ86WB7 457 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 ZC3H3Q8IXZ2 948 aaKnown RBP18.18■□□□□ 0.5
SSBP1-207ENST00000468267 CRYBG2Q8N1P7 616 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 SLC22A12Q96S37 553 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 CYP2S1Q96SQ9 504 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 FAM83CQ9BQN1 747 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 IMPG2Q9BZV3 1241 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 MMRN2Q9H8L6 949 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 APOBEC3GQ9HC16 384 aaKnown RBP18.18■□□□□ 0.5
SSBP1-207ENST00000468267 TRPC7Q9HCX4 862 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.18■□□□□ 0.53e-8■■■■■ 34.9
SSBP1-207ENST00000468267 GKN1Q9NS71 199 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 SPATA6Q9NWH7 488 aaPredicted RBP18.18■□□□□ 0.5
SSBP1-207ENST00000468267 GTSE1Q9NYZ3 720 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 GCNT4Q9P109 453 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 ATP8B3O60423 1300 aa18.18■□□□□ 0.5
SSBP1-207ENST00000468267 C2orf78A6NCI8 922 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 USP17L7P0C7H9 530 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 CCNE1P24864 410 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 SOX9P48436 509 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 NDST1P52848 882 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 PMS1P54277 932 aaKnown RBP18.17■□□□□ 0.5
SSBP1-207ENST00000468267 LRRC63Q05C16 580 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 TNK2Q07912 1038 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 KRT39Q6A163 491 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 RALGPS2Q86X27 583 aaPredicted RBP18.17■□□□□ 0.5
SSBP1-207ENST00000468267 MAML2Q8IZL2 1156 aaPredicted RBP18.17■□□□□ 0.5
SSBP1-207ENST00000468267 MED10Q9BTT4 135 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 CYP3A43Q9HB55 503 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 TRPM5Q9NZQ8 1165 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 MAN1B1Q9UKM7 699 aa18.17■□□□□ 0.5
SSBP1-207ENST00000468267 HELZP42694 1942 aaKnown RBP18.17■□□□□ 0.5
SSBP1-207ENST00000468267 GVINP1Q7Z2Y8 2422 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 SPECC1L-ADORA2AF8WAN1 911 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 SLC16A3O15427 465 aaKnown RBP18.16■□□□□ 0.5
SSBP1-207ENST00000468267 STX10O60499 249 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 CKMP06732 381 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 SP9P0CG40 484 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 PFKLP17858 780 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 HDCP19113 662 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 CTHP32929 405 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 PPP3CCP48454 512 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 FKBP3Q00688 224 aaKnown RBP18.16■□□□□ 0.5
SSBP1-207ENST00000468267 INCA1Q0VD86 236 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 ITPRIPL2Q3MIP1 535 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 FAM35AQ86V20 835 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 FUKQ8N0W3 1084 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 NUP93Q8N1F7 819 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 ARL14EPQ8N8R7 260 aaPredicted RBP18.16■□□□□ 0.5
SSBP1-207ENST00000468267 TTC8Q8TAM2 541 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 RIN3Q8TB24 985 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 SMARCD1Q96GM5 515 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 KCNK16Q96T55 309 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 LMAN1LQ9HAT1 526 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 HMGXB4Q9UGU5 601 aa18.16■□□□□ 0.5
SSBP1-207ENST00000468267 TRIM49BA6NDI0 452 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 ZNF840PA6NDX5 716 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 LAMTOR5O43504 91 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 RTN3O95197 1032 aaPredicted RBP18.15■□□□□ 0.5
SSBP1-207ENST00000468267 PDE6CP51160 858 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 TAF10Q12962 218 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 ORC1Q13415 861 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 STIM1Q13586 685 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 ISM2Q6H9L7 571 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 CC2D1AQ6P1N0 951 aaPredicted RBP18.15■□□□□ 0.5
SSBP1-207ENST00000468267 CCDC150Q8NCX0 1101 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 FBXL13Q8NEE6 735 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 SEMA4DQ92854 862 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 DHTKD1Q96HY7 919 aaPredicted RBP18.15■□□□□ 0.5
SSBP1-207ENST00000468267 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 CHRDQ9H2X0 955 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 DMAP1Q9NPF5 467 aaPredicted RBP18.15■□□□□ 0.5
SSBP1-207ENST00000468267 HPS4Q9NQG7 708 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 FBXO4Q9UKT5 387 aa18.15■□□□□ 0.5
SSBP1-207ENST00000468267 TNFRSF10BO14763 440 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 PSMA7O14818 248 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 GFRA3O60609 400 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms