RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ASIC1P78348 528 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 AMPD3Q01432 767 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 E2F4Q16254 413 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 SNRNP35Q16560 246 aaKnown RBP18.44■□□□□ 0.54
TRIM56-203ENST00000467847 SYT13Q7L8C5 426 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 TRAPPC11Q7Z392 1133 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 RDH13Q8NBN7 331 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 LINC00301Q8NCQ3 95 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 MYCBPAPQ8TBZ2 947 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 EZH1Q92800 747 aaPredicted RBP18.44■□□□□ 0.54
TRIM56-203ENST00000467847 ACDQ96AP0 544 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 DHX58Q96C10 678 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 PCED1BQ96HM7 432 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 CEP295NLQ96MC4 621 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 LINC00597Q9H2U6 94 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 SNX25Q9H3E2 840 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 CUEDC2Q9H467 287 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 TRPM5Q9NZQ8 1165 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 TRIM66O15016 1216 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 NFATC1O95644 943 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 APBB3O95704 486 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 TCF3P15923 654 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 TNNI1P19237 187 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 USP46P62068 366 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 DMC1Q14565 340 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 MDH1BQ5I0G3 518 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 DENND5BQ6ZUT9 1274 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 EPM2AIP1Q7L775 607 aaPredicted RBP18.43■□□□□ 0.54
TRIM56-203ENST00000467847 ZC3H10Q96K80 434 aaKnown RBP18.43■□□□□ 0.54
TRIM56-203ENST00000467847 MRPL45Q9BRJ2 306 aaKnown RBP18.43■□□□□ 0.54
TRIM56-203ENST00000467847 AGPAT3Q9NRZ7 376 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 EHD2Q9NZN4 543 aa18.43■□□□□ 0.54
TRIM56-203ENST00000467847 RALYQ9UKM9 306 aaKnown RBP18.43■□□□□ 0.54
TRIM56-203ENST00000467847 PPP6R2O75170 966 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 PFKLP17858 780 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 GNL1P36915 607 aaPredicted RBP18.42■□□□□ 0.54
TRIM56-203ENST00000467847 CYP2J2P51589 502 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 LIMK1P53667 647 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 FAM26FQ5R3K3 315 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 HS2ST1Q7LGA3 356 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 IQUBQ8NA54 791 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 CCDC26Q8TAB7 109 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 ZNF507Q8TCN5 953 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 CCDC127Q96BQ5 260 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 ZNF396Q96N95 335 aaPredicted RBP18.42■□□□□ 0.54
TRIM56-203ENST00000467847 FNBP1Q96RU3 617 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 TFIP11Q9UBB9 837 aaKnown RBP18.42■□□□□ 0.54
TRIM56-203ENST00000467847 PCDHGA5Q9Y5G8 931 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 LAMA1P25391 3075 aa18.42■□□□□ 0.54
TRIM56-203ENST00000467847 F8VP50 259 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 LEFTY2O00292 366 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 TGFB1I1O43294 461 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 TACC1O75410 805 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 CST3P01034 146 aaPredicted RBP18.41■□□□□ 0.54
TRIM56-203ENST00000467847 MPLP40238 635 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 TNNC1P63316 161 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 NOP14P78316 857 aaKnown RBP18.41■□□□□ 0.54
TRIM56-203ENST00000467847 ZXDBP98169 803 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 CYP24A1Q07973 514 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 PSMD6Q15008 389 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 ELF2Q15723 593 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 PLK5Q496M5 336 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 PLA2G2CQ5R387 149 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 CNNM4Q6P4Q7 775 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 NELFCDQ8IXH7 590 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 OR6B3Q8NGW1 331 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 CGRRF1Q99675 332 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 TTLL2Q9BWV7 592 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 SMOC1Q9H4F8 434 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 RXFP3Q9NSD7 469 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 EBF1Q9UH73 591 aa18.41■□□□□ 0.54
TRIM56-203ENST00000467847 ZNF840PA6NDX5 716 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 K7ELQ4 463 aaPredicted RBP18.4■□□□□ 0.54
TRIM56-203ENST00000467847 DCLK1O15075 740 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 CLIC2O15247 247 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 ABL1P00519 1130 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 PPP3CCP48454 512 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 SEC13P55735 322 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 WDR72Q3MJ13 1102 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 XXYLT1Q8NBI6 393 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 TSTD1Q8NFU3 115 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 C8orf48Q96LL4 319 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 C7orf25Q9BPX7 421 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 DUSP15Q9H1R2 295 aaPredicted RBP18.4■□□□□ 0.54
TRIM56-203ENST00000467847 VPS45Q9NRW7 570 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 NME7Q9Y5B8 376 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 UBE4BO95155 1302 aa18.4■□□□□ 0.54
TRIM56-203ENST00000467847 NUP205Q92621 2012 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 CUTAO60888 179 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 RHOBTB1O94844 696 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 PTPN1P18031 435 aaKnown RBP18.39■□□□□ 0.53
TRIM56-203ENST00000467847 OPRD1P41143 372 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 DGKEP52429 567 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 SNRPFP62306 86 aaKnown RBP18.39■□□□□ 0.53
TRIM56-203ENST00000467847 SLC7A9P82251 487 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 TRPC3Q13507 836 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 C2orf27AQ580R0 203 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 STPG1Q5TH74 334 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 TDRD10Q5VZ19 366 aaKnown RBP18.39■□□□□ 0.53
TRIM56-203ENST00000467847 SHC4Q6S5L8 630 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms