RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 ZNF397Q8NF99 534 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-203ENST00000467514 ZNF516Q92618 1163 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 CCDC127Q96BQ5 260 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 CHP1Q99653 195 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 ADPGKQ9BRR6 497 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 ARRDC1-AS1Q9H2J1 176 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 PDZD7Q9H5P4 517 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 TMEM8AQ9HCN3 771 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 ZNF334Q9HCZ1 680 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-203ENST00000467514 TOPORSQ9NS56 1045 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-203ENST00000467514 AIPL1Q9NZN9 384 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 GCNT4Q9P109 453 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 ANKFY1Q9P2R3 1169 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 PTPRJQ12913 1337 aa11.77□□□□□ -0.53
PRPF3-203ENST00000467514 F5P12259 2224 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 A0A1B0GUA9 196 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 LRRC53A6NM62 1247 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 MEFVO15553 781 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-203ENST00000467514 TRAPPC3O43617 180 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 NRDCO43847 1150 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 MCF2P10911 925 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 MXI1P50539 228 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 POLR2FP61218 127 aaKnown RBP11.76□□□□□ -0.53
PRPF3-203ENST00000467514 FAM78AQ5JUQ0 283 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 STPG1Q5TH74 334 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 HGSNATQ68CP4 663 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 PSAPL1Q6NUJ1 521 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 ANKS3Q6ZW76 656 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 SV2AQ7L0J3 742 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 RRAGAQ7L523 313 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 GSTCDQ8NEC7 633 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 DEPDC1BQ8WUY9 529 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 SEMA4DQ92854 862 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 NUCKS1Q9H1E3 243 aaKnown RBP11.76□□□□□ -0.53
PRPF3-203ENST00000467514 CYP4F11Q9HBI6 524 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 RBAKQ9NYW8 714 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-203ENST00000467514 MTRRQ9UBK8 725 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 ZMIZ1Q9ULJ6 1067 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 FHOD1Q9Y613 1164 aa11.76□□□□□ -0.53
PRPF3-203ENST00000467514 SPAG17Q6Q759 2223 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 SLC38A8A6NNN8 435 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 USP27XA6NNY8 438 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 RECQL4O94761 1208 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 B3GAT3O94766 335 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 C4BPAP04003 597 aaKnown RBP11.75□□□□□ -0.53
PRPF3-203ENST00000467514 MYL4P12829 197 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 CLCN1P35523 988 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 TNFSF9P41273 254 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 LIMK1P53667 647 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 FOXC1Q12948 553 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 ENOX2Q16206 610 aaKnown RBP11.75□□□□□ -0.53
PRPF3-203ENST00000467514 ASTE1Q2TB18 679 aaPredicted RBP11.75□□□□□ -0.53
PRPF3-203ENST00000467514 ZNF568Q3ZCX4 644 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 ZACNQ401N2 412 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 RNF43Q68DV7 783 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 KRT39Q6A163 491 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 GJB7Q6PEY0 223 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 C1orf228Q6PIY5 440 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 VITQ6UXI7 678 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 TOGARAM2Q6ZUX3 1019 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 USP37Q86T82 979 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 REXO1L1PQ8IX06 675 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 TAS1R2Q8TE23 839 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 SMARCD2Q92925 531 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 TCEAL4Q96EI5 215 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 ASB16Q96NS5 453 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 CGRRF1Q99675 332 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 GPR88Q9GZN0 384 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 PDE11AQ9HCR9 933 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 NLRC4Q9NPP4 1024 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 RBM12Q9NTZ6 932 aaKnown RBP11.75□□□□□ -0.53
PRPF3-203ENST00000467514 SNTG2Q9NY99 539 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 ARHGAP20Q9P2F6 1191 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 APEX2Q9UBZ4 518 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 SDK1Q7Z5N4 2213 aa11.75□□□□□ -0.53
PRPF3-203ENST00000467514 ANKRD11Q6UB99 2663 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-203ENST00000467514 WDR27A2RRH5 827 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 C1QTNF9BB2RNN3 333 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 KCNK5O95279 499 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 VNN1O95497 513 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 CLTAP09496 248 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 C1QTNF9P0C862 333 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 CHRNB1P11230 501 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-203ENST00000467514 FCARP24071 287 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 TKTP29401 623 aaKnown RBP11.74□□□□□ -0.53
PRPF3-203ENST00000467514 NOVA1P51513 510 aaKnown RBP11.74□□□□□ -0.53
PRPF3-203ENST00000467514 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
PRPF3-203ENST00000467514 SEZ6Q53EL9 994 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 CACNA2D4Q7Z3S7 1137 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 IRF2BP2Q7Z5L9 587 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 CCDC170Q8IYT3 715 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 CEP120Q8N960 986 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 OLIG1Q8TAK6 271 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 MSANTD3Q96H12 275 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 FAM84AQ96KN4 292 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 PPP1R13BQ96KQ4 1090 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 ZNF512Q96ME7 567 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms