RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 KLRC1P26715 233 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 ALDH9A1P49189 494 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 PRKAG1P54619 331 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 PROK1P58294 105 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 C21orf58P58505 322 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 FAM193AP78312 1265 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 POLD3Q15054 466 aaPredicted RBP4.59□□□□□ -1.67
VPS50-209ENST00000467326 CCDC142Q17RM4 750 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 PLA1AQ53H76 456 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 ZNF804AQ7Z570 1209 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 LRRC71Q8N4P6 559 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 FAM156AQ8NDB6 213 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 TTC8Q8TAM2 541 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 OSCP1Q8WVF1 389 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 GLG1Q92896 1179 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 TRIM43Q96BQ3 446 aaPredicted RBP4.59□□□□□ -1.67
VPS50-209ENST00000467326 R3HDM4Q96D70 268 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 LRRC27Q9C0I9 530 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 A1CFQ9NQ94 594 aaKnown RBP4.59□□□□□ -1.67
VPS50-209ENST00000467326 SERTAD4Q9NUC0 356 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 ZSCAN32Q9NX65 697 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 LAS1LQ9Y4W2 734 aaKnown RBP4.59□□□□□ -1.67
VPS50-209ENST00000467326 FRMPD2Q68DX3 1309 aaPredicted RBP4.58□□□□□ -1.68
VPS50-209ENST00000467326 H0YIZ8 118 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 GOLIM4O00461 696 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 MGEA5O60502 916 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 HRGP04196 525 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 KCNA3P22001 575 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 PEX2P28328 305 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 ADORA2AP29274 412 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 DGKEP52429 567 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 SUMO3P55854 103 aaPredicted RBP4.58□□□□□ -1.68
VPS50-209ENST00000467326 TPTEP56180 551 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 KIAA0753Q2KHM9 967 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 RNF220Q5VTB9 566 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 ANKRD16Q6P6B7 361 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 DARS2Q6PI48 645 aaKnown RBP4.58□□□□□ -1.68
VPS50-209ENST00000467326 CHST15Q7LFX5 561 aaPredicted RBP4.58□□□□□ -1.68
VPS50-209ENST00000467326 SLC29A4Q7RTT9 530 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 WDR53Q7Z5U6 358 aaPredicted RBP4.58□□□□□ -1.68
VPS50-209ENST00000467326 C14orf80Q86SX3 495 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 MICU3Q86XE3 530 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 FMNL3Q8IVF7 1028 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 OR56A3Q8NH54 315 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 BPIFB1Q8TDL5 484 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 TBC1D5Q92609 795 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 SPSB4Q96A44 273 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 BHMT2Q9H2M3 363 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 SACM1LQ9NTJ5 587 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 OBP2AQ9NY56 170 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 CPNE7Q9UBL6 633 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 ADAM21Q9UKJ8 722 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 OGDHLQ9ULD0 1010 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 PADI4Q9UM07 663 aa4.58□□□□□ -1.68
VPS50-209ENST00000467326 A1L4Q6 167 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 QSOX1O00391 747 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 RBMXL2O75526 392 aaKnown RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 ERBB2P04626 1255 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 HNRNPCP07910 306 aaKnown RBP eCLIP4.57□□□□□ -1.68
VPS50-209ENST00000467326 ZNF37AP17032 561 aaPredicted RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 CYP2C18P33260 490 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 TBX4P57082 545 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 EEFSECP57772 596 aaKnown RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 RPS16P62249 146 aaKnown RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 CNGA2Q16280 664 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 AARS2Q5JTZ9 985 aaKnown RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 CERCAMQ5T4B2 595 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 FCRLBQ6BAA4 426 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 ZNF788Q6ZQV5 615 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 GPATCH11Q8N954 259 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 PNISRQ8TF01 805 aaKnown RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 XAGE5Q8WWM1 108 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 SOCS4Q8WXH5 440 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 NMD3Q96D46 503 aaKnown RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 RPS6KC1Q96S38 1066 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 PPP1R9BQ96SB3 815 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 ADARB2Q9NS39 739 aaKnown RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 TRMT13Q9NUP7 481 aaKnown RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 DLL3Q9NYJ7 618 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 SNX14Q9Y5W7 946 aa4.57□□□□□ -1.68
VPS50-209ENST00000467326 ARHGEF17Q96PE2 2063 aaPredicted RBP4.57□□□□□ -1.68
VPS50-209ENST00000467326 MANSC4A6NHS7 340 aaPredicted RBP4.56□□□□□ -1.68
VPS50-209ENST00000467326 PYCARD-AS1I3L0S3 204 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 PLIN1O60240 522 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 NPSP0C0P6 89 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 ENGP17813 658 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 RHCEP18577 417 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 PDE1AP54750 535 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 RHBDL3P58872 404 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 RHDQ02161 417 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 GALEQ14376 348 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 C3orf38Q5JPI3 329 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 CACHD1Q5VU97 1274 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 SUMO4Q6EEV6 95 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 CEP85Q6P2H3 762 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 PTF1AQ7RTS3 328 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 SPARTQ8N0X7 666 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 ABRAQ8N0Z2 381 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 RP9Q8TA86 221 aaKnown RBP4.56□□□□□ -1.68
VPS50-209ENST00000467326 HASPINQ8TF76 798 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms