RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 PVALEFA0A1B0GWK0 134 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 DCLK1O15075 740 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 TCF3P15923 654 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 CYP2F1P24903 491 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 ADSSP30520 456 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 AFMP43652 599 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 IFNAR2P48551 515 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 NOVA1P51513 510 aaKnown RBP16.83■□□□□ 0.28
TSSC4-208ENST00000467308 NR1H3Q13133 447 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 KCNB1Q14721 858 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 DDR2Q16832 855 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 EML3Q32P44 896 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 CFAP221Q4G0U5 840 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 INTS6LQ5JSJ4 861 aaKnown RBP16.83■□□□□ 0.28
TSSC4-208ENST00000467308 SDHAF4Q5VUM1 108 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 DAB2IPQ5VWQ8 1189 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 THADAQ6YHU6 1953 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 ZNF720Q7Z2F6 126 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 GRAMD1CQ8IYS0 662 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 ASPMQ8IZT6 3477 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 STKLD1Q8NE28 680 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 SMARCE1Q969G3 411 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 PKMYT1Q99640 499 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 DDX43Q9NXZ2 648 aaKnown RBP16.83■□□□□ 0.28
TSSC4-208ENST00000467308 L1RE1Q9UN81 338 aa16.83■□□□□ 0.28
TSSC4-208ENST00000467308 HELZP42694 1942 aaKnown RBP16.82■□□□□ 0.28
TSSC4-208ENST00000467308 LNP1A1A4G5 178 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 MYMKA6NI61 221 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 C4orf47A7E2U8 309 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 HUS1O60921 280 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 PPP1R37O75864 691 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 CKMP06732 381 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 MYL7Q01449 175 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 CUL4BQ13620 913 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 USP39Q53GS9 565 aaKnown RBP16.82■□□□□ 0.28
TSSC4-208ENST00000467308 PMS2CLQ68D20 193 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 LRRC52Q8N7C0 313 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 TSTD1Q8NFU3 115 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 CACTINQ8WUQ7 758 aaKnown RBP16.82■□□□□ 0.28
TSSC4-208ENST00000467308 FUBP3Q96I24 572 aaKnown RBP eCLIP16.82■□□□□ 0.28
TSSC4-208ENST00000467308 SLC22A12Q96S37 553 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 CYP2S1Q96SQ9 504 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 TRPC7Q9HCX4 862 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 RMND1Q9NWS8 449 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 GCNT4Q9P109 453 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 WNT6Q9Y6F9 365 aa16.82■□□□□ 0.28
TSSC4-208ENST00000467308 ITGB3P05106 788 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 POLR2BP30876 1174 aaKnown RBP16.81■□□□□ 0.28
TSSC4-208ENST00000467308 GBP1P32455 592 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 PDE6CP51160 858 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 DGKEP52429 567 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 TFAMQ00059 246 aaKnown RBP16.81■□□□□ 0.28
TSSC4-208ENST00000467308 PSMD2Q13200 908 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 SASS6Q6UVJ0 657 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 RASSF3Q86WH2 238 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 TOP6BLQ8N6T0 577 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 C1orf127Q8N9H9 656 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 USP33Q8TEY7 942 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 DNAJC19Q96DA6 116 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 STRA6Q9BX79 667 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 IKZF4Q9H2S9 585 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 GDAP2Q9NXN4 497 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 SEL1LQ9UBV2 794 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 GTF3C4Q9UKN8 822 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 ITGA11Q9UKX5 1188 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 ARHGAP26Q9UNA1 814 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 AGAP1Q9UPQ3 857 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 EXOC7Q9UPT5 735 aa16.81■□□□□ 0.28
TSSC4-208ENST00000467308 ZZEF1O43149 2961 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 PTPRDP23468 1912 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 FRMD3A2A2Y4 597 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 GABRDO14764 452 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 KHNYNO15037 678 aaKnown RBP16.8■□□□□ 0.28
TSSC4-208ENST00000467308 KLRC4O43908 158 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 RHOBTB3O94955 611 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 NFATC1O95644 943 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 RPN1P04843 607 aaKnown RBP16.8■□□□□ 0.28
TSSC4-208ENST00000467308 PFKLP17858 780 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 CSRP1P21291 193 aaKnown RBP16.8■□□□□ 0.28
TSSC4-208ENST00000467308 ACAT1P24752 427 aaKnown RBP16.8■□□□□ 0.28
TSSC4-208ENST00000467308 PCSK1P29120 753 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 LHX1P48742 406 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 TYRO3Q06418 890 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 MORC3Q14149 939 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 UNQ6494/PRO21346Q6UXR6 183 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 UNC13DQ70J99 1090 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 SFR1Q86XK3 245 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
TSSC4-208ENST00000467308 KIAA1958Q8N8K9 716 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 CXorf38Q8TB03 319 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 SH3RF2Q8TEC5 729 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 CNOT6LQ96LI5 555 aaKnown RBP16.8■□□□□ 0.28
TSSC4-208ENST00000467308 CEP295NLQ96MC4 621 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 FAM213AQ9BRX8 229 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 TMEM9BQ9NQ34 198 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 ANO10Q9NW15 660 aa16.8■□□□□ 0.28
TSSC4-208ENST00000467308 WASF3Q9UPY6 502 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms