RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CASP8Q14790 479 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 UPP1Q16831 310 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 CYP4A22Q5TCH4 519 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 AADACL2Q6P093 401 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 ECHDC2Q86YB7 292 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 C12orf29Q8N999 325 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 UBA3Q8TBC4 463 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 SLCO2A1Q92959 643 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 SENP8Q96LD8 212 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 HNRNPABQ99729 332 aaKnown RBP10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 ADAM2Q99965 735 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 NCAPGQ9BPX3 1015 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 FTHL17Q9BXU8 183 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 OSBPL7Q9BZF2 842 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 UBXN6Q9BZV1 441 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 TRPV6Q9H1D0 765 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 GOLGA2P5Q9HBQ8 144 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 EPB41L5Q9HCM4 733 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 RNF19AQ9NV58 838 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 MIOSQ9NXC5 875 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 AMACRQ9UHK6 382 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 EFR3BQ9Y2G0 817 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 TRIM17Q9Y577 477 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 MYH10P35580 1976 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 ARHGEF37A1IGU5 675 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 C2CD4BA6NLJ0 364 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 C9IYK1 514 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 E5RJQ4 531 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 F8VP50 259 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 GOLGA8SH3BPF8 625 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 TLL1O43897 1013 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 GJB6O95452 261 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 CYP11A1P05108 521 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 KRT7P08729 469 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 MYBL2P10244 700 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 YY1P25490 414 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 LMO2P25791 158 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 PCK1P35558 622 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 COILP38432 576 aaPredicted RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 PTGIRP43119 386 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 SCNN1GP51170 649 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 ZNF143P52747 638 aaPredicted RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 MRPS25P82663 173 aaKnown RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 DR1Q01658 176 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 KLF1Q13351 362 aaPredicted RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 TUSC3Q13454 348 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 HADHQ16836 314 aaKnown RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 RALGAPA2Q2PPJ7 1873 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 PMF1Q6P1K2 205 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 SYDE1Q6ZW31 735 aaPredicted RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 SLC24A5Q71RS6 500 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 OSTM1Q86WC4 334 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 MREGQ8N565 214 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 JOSD2Q8TAC2 188 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 CASKIN2Q8WXE0 1202 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 LPPQ93052 612 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 ERP44Q9BS26 406 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 CNPY3Q9BT09 278 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 OSBPL8Q9BZF1 889 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 RAB17Q9H0T7 212 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 ACBD3Q9H3P7 528 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 DPEP3Q9H4B8 488 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 PAK6Q9NQU5 681 aaPredicted RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 METTL5Q9NRN9 209 aaKnown RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 FAM114A2Q9NRY5 505 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 ASNSD1Q9NWL6 643 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 TJP2Q9UDY2 1190 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 RASAL2Q9UJF2 1139 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 USTQ9Y2C2 406 aa10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 UTP11Q9Y3A2 253 aaKnown RBP10.03□□□□□ -0.8
APOBEC1-202ENST00000467171 XPO1O14980 1071 aaKnown RBP10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 TTI1O43156 1089 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 LRCH4O75427 683 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 PDGFRBP09619 1106 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 SELPP16109 830 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 GPD1P21695 349 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 CARSP49589 748 aaKnown RBP10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 CLCNKBP51801 687 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 AFF1P51825 1210 aaKnown RBP10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 SLC6A3Q01959 620 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 PLCB3Q01970 1234 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 SLC25A11Q02978 314 aaKnown RBP10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 PDE4CQ08493 712 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 BFSP2Q13515 415 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 TAZQ16635 292 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 FAM102AQ5T9C2 384 aaPredicted RBP10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 WSCD1Q658N2 575 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 DUPD1Q68J44 220 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 OR6B2Q6IFH4 312 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 DRICH1Q6PGQ1 229 aaPredicted RBP10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 DCLRE1AQ6PJP8 1040 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 OLFML1Q6UWY5 402 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 FAM183BPQ6ZVS7 135 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 SLC26A9Q7LBE3 791 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms