RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 VCPP55072 806 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 NLRP12P59046 1061 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 USP46P62068 366 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 DPCR1Q3MIW9 517 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 VITQ6UXI7 678 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 DENND5BQ6ZUT9 1274 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 YAF2Q8IY57 180 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 C12orf29Q8N999 325 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 SLC2A14Q8TDB8 520 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 MRPS31Q92665 395 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 SMARCD2Q92925 531 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 NXPE3Q969Y0 559 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 SLC35C1Q96A29 364 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 CNOT6LQ96LI5 555 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 BCO2Q9BYV7 579 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 ELOVL4Q9GZR5 314 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 BRD9Q9H8M2 597 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 TMEM30AQ9NV96 361 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 HCN4Q9Y3Q4 1203 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 KRBA1A5PL33 1030 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 HEPACAM2A8MVW5 462 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 ESPNB1AK53 854 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 ECI2O75521 394 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 AP1G2O75843 785 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 NOL4O94818 638 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 PRAMEF12O95522 483 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 FGF19O95750 216 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 F11P03951 625 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 CCDC192P0DO97 292 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 TRIM21P19474 475 aaKnown RBP10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 GDI1P31150 447 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 MAGEA11P43364 429 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 MAP3K7CLP57077 242 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 ENPEPQ07075 957 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 CCDC183Q5T5S1 534 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 TXNDC8Q6A555 127 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 VSTM1Q6UX27 236 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 FRMD5Q7Z6J6 570 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 ARID3BQ8IVW6 561 aaPredicted RBP10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 FBXL6Q8N531 539 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 TTC8Q8TAM2 541 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 ELSPBP1Q96BH3 223 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 RSPRY1Q96DX4 576 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 KCNK16Q96T55 309 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 GPR88Q9GZN0 384 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 TASP1Q9H6P5 420 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 ARHGEF3Q9NR81 526 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 UXTQ9UBK9 157 aaPredicted RBP10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 RWDD2AQ9UIY3 292 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 BDP1A6H8Y1 2624 aa10.34□□□□□ -0.75
RTFDC1-205ENST00000466260 CILPO75339 1184 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 BEST1O76090 585 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 MICAL2O94851 1124 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 FGFR1OPO95684 399 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 AFPP02771 609 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 CKMP06732 381 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 FAM163BP0C2L3 166 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 CD72P21854 359 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 MSNP26038 577 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 AVPR1AP37288 418 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 MTIF2P46199 727 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 KCNH2Q12809 1159 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 CWF19L1Q69YN2 538 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 PAQR9Q6ZVX9 377 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 UNC93AQ86WB7 457 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 FUKQ8N0W3 1084 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 PPM1KQ8N3J5 372 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 MLKLQ8NB16 471 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 KAT5Q92993 513 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 CYFIP2Q96F07 1278 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 SMARCD1Q96GM5 515 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 ZFYVE19Q96K21 471 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 HEXIM2Q96MH2 286 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 NT5C1BQ96P26 610 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 TRMT61BQ9BVS5 477 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 SLC46A2Q9BY10 475 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 TSPY26PQ9H489 355 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 TBC1D17Q9HA65 648 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 CYP3A43Q9HB55 503 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 DMAP1Q9NPF5 467 aaPredicted RBP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 HEBP1Q9NRV9 189 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 CISHQ9NSE2 258 aa10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.33□□□□□ -0.76
RTFDC1-205ENST00000466260 C2orf78A6NCI8 922 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 PES1O00541 588 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 ZNF263O14978 683 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 CAVIN2O95810 425 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 GNA14O95837 355 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 FAM200BP0CF97 657 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 PSMC3P17980 439 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 SLC5A3P53794 718 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 INCA1Q0VD86 236 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 CETN1Q12798 172 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 TAF10Q12962 218 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 CUL2Q13617 745 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 UBXN2BQ14CS0 331 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 MLF2Q15773 248 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 PPP1R26Q5T8A7 1209 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms