RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 USP13Q92995 863 aaPredicted RBP10.81□□□□□ -0.68
CD40-204ENST00000466205 CYFIP2Q96F07 1278 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 TRMT2BQ96GJ1 504 aaKnown RBP10.81□□□□□ -0.68
CD40-204ENST00000466205 SMARCD1Q96GM5 515 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 SPATA17Q96L03 361 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 C8orf48Q96LL4 319 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 CEP63Q96MT8 703 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 GBP4Q96PP9 640 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 NT5C1AQ9BXI3 368 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 TRPV4Q9HBA0 871 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 METTL14Q9HCE5 456 aaKnown RBP10.81□□□□□ -0.68
CD40-204ENST00000466205 CISHQ9NSE2 258 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 GTSE1Q9NYZ3 720 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 NCOR1O75376 2440 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 ATP8B3O60423 1300 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 OBSL1O75147 1896 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 TICRRQ7Z2Z1 1910 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 TRAV19A0A0A6YYK7 116 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 KANSL1LA0AUZ9 987 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 CILPO75339 1184 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 CLCN5P51795 746 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 KPNA1P52294 538 aaPredicted RBP10.8□□□□□ -0.68
CD40-204ENST00000466205 ENPEPQ07075 957 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 INCA1Q0VD86 236 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 TCF15Q12870 199 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 DPCR1Q3MIW9 517 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 HSP90AA4PQ58FG1 418 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 PPP1R26Q5T8A7 1209 aaPredicted RBP10.8□□□□□ -0.68
CD40-204ENST00000466205 GPRIN1Q7Z2K8 1008 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 MON1AQ86VX9 555 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 UNC93AQ86WB7 457 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 NUP93Q8N1F7 819 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 TRIML1Q8N9V2 468 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 ZMIZ2Q8NF64 920 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 PJA1Q8NG27 643 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 GPT2Q8TD30 523 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 KAT5Q92993 513 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 FAM122AQ96E09 287 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 MYRFLQ96LU7 910 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 HEXIM2Q96MH2 286 aaKnown RBP10.8□□□□□ -0.68
CD40-204ENST00000466205 MED15Q96RN5 788 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 PHOX2BQ99453 314 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 SMOQ99835 787 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 CYP3A43Q9HB55 503 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 DMAP1Q9NPF5 467 aaPredicted RBP10.8□□□□□ -0.68
CD40-204ENST00000466205 SMPD4Q9NXE4 827 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 TRPM5Q9NZQ8 1165 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 CHORDC1Q9UHD1 332 aaPredicted RBP10.8□□□□□ -0.68
CD40-204ENST00000466205 SIT1Q9Y3P8 196 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 PIAS3Q9Y6X2 628 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 NUP210Q8TEM1 1887 aaPredicted RBP10.8□□□□□ -0.68
CD40-204ENST00000466205 PTPRDP23468 1912 aa10.8□□□□□ -0.68
CD40-204ENST00000466205 FAM170BA6NMN3 283 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 CALCAP01258 141 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 FAM200BP0CF97 657 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 GLULP15104 373 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 HDCP19113 662 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 DDX6P26196 483 aaKnown RBP eCLIP10.79□□□□□ -0.68
CD40-204ENST00000466205 TARSP26639 723 aaKnown RBP10.79□□□□□ -0.68
CD40-204ENST00000466205 YWHAQP27348 245 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 STARD6P59095 220 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 PRKCQQ04759 706 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 FCHO2Q0JRZ9 810 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 KCNH2Q12809 1159 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 CUL2Q13617 745 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 TPD52L1Q16890 204 aaPredicted RBP10.79□□□□□ -0.68
CD40-204ENST00000466205 CRYBG2Q8N1P7 616 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 CELF5Q8N6W0 485 aaKnown RBP10.79□□□□□ -0.68
CD40-204ENST00000466205 DNASE1L2Q92874 299 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 FBXO32Q969P5 355 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 E2F7Q96AV8 911 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 SHDQ96IW2 340 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 CNOT6LQ96LI5 555 aaKnown RBP10.79□□□□□ -0.68
CD40-204ENST00000466205 EBF3Q9H4W6 596 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 LTB4R2Q9NPC1 389 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 GKN1Q9NS71 199 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 TDP1Q9NUW8 608 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 GMIPQ9P107 970 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 RWDD2AQ9UIY3 292 aa10.79□□□□□ -0.68
CD40-204ENST00000466205 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.79□□□□□ -0.68
CD40-204ENST00000466205 COL4A2P08572 1712 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 ZNF840PA6NDX5 716 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 SHISA7A6NL88 538 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 ARNTLO00327 626 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 CHADO15335 359 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
CD40-204ENST00000466205 AFPP02771 609 aaKnown RBP10.78□□□□□ -0.68
CD40-204ENST00000466205 USP17L7P0C7H9 530 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 MBL2P11226 248 aaPredicted RBP10.78□□□□□ -0.68
CD40-204ENST00000466205 ARSAP15289 507 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 TRIM21P19474 475 aaKnown RBP10.78□□□□□ -0.68
CD40-204ENST00000466205 HOXD11P31277 338 aaPredicted RBP10.78□□□□□ -0.68
CD40-204ENST00000466205 PGFP49763 221 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 RAD23BP54727 409 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 ZXDBP98169 803 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 NHLH1Q02575 133 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 MTF1Q14872 753 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 ARHGAP29Q52LW3 1261 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 PHLDB3Q6NSJ2 640 aa10.78□□□□□ -0.68
CD40-204ENST00000466205 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms