RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 CD101Q93033 1021 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 IGSF21Q96ID5 467 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 CARD6Q9BX69 1037 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 MIS12Q9H081 205 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 ZCWPW1Q9H0M4 648 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 DDX3YO15523 660 aaKnown RBP16.26■□□□□ 0.19
GYPC-205ENST00000464053 PROSCO94903 275 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 BDNFP23560 247 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 MARCKSL1P49006 195 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 CTXN3Q4LDR2 81 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 SLC39A12Q504Y0 691 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 FAM102AQ5T9C2 384 aaPredicted RBP16.26■□□□□ 0.19
GYPC-205ENST00000464053 RSPO2Q6UXX9 243 aaPredicted RBP16.26■□□□□ 0.19
GYPC-205ENST00000464053 CREG2Q8IUH2 290 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 KRT35Q92764 455 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 YME1L1Q96TA2 773 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 LAMA2P24043 3122 aaKnown RBP16.25■□□□□ 0.19
GYPC-205ENST00000464053 GRAP2O75791 330 aa16.25■□□□□ 0.19
GYPC-205ENST00000464053 RNASE9P60153 205 aaKnown RBP16.25■□□□□ 0.19
GYPC-205ENST00000464053 ELAVL2Q12926 359 aaKnown RBP16.25■□□□□ 0.19
GYPC-205ENST00000464053 TRNP1Q6NT89 227 aa16.25■□□□□ 0.19
GYPC-205ENST00000464053 NDRG1Q92597 394 aaKnown RBP16.25■□□□□ 0.19
GYPC-205ENST00000464053 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.192e-7■■■■□ 24.2
GYPC-205ENST00000464053 SMARCD1Q96GM5 515 aa16.25■□□□□ 0.19
GYPC-205ENST00000464053 HSFY1Q96LI6 401 aa16.25■□□□□ 0.19
GYPC-205ENST00000464053 EHD2Q9NZN4 543 aa16.25■□□□□ 0.19
GYPC-205ENST00000464053 PDE2AO00408 941 aaPredicted RBP16.24■□□□□ 0.19
GYPC-205ENST00000464053 KCNK3O14649 394 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 SPOPO43791 374 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 GJB5O95377 273 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 TCP1P17987 556 aaKnown RBP16.24■□□□□ 0.19
GYPC-205ENST00000464053 NDUFV1P49821 464 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 SLC8A3P57103 927 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 SLC6A3Q01959 620 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 TAP1Q03518 808 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 TUBB2AQ13885 445 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 DCAF12L1Q5VU92 463 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 PRSS55Q6UWB4 352 aaPredicted RBP16.24■□□□□ 0.19
GYPC-205ENST00000464053 GPRIN1Q7Z2K8 1008 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 RNF168Q8IYW5 571 aaPredicted RBP16.24■□□□□ 0.19
GYPC-205ENST00000464053 SLC39A11Q8N1S5 342 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 COLGALT1Q8NBJ5 622 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 ALG3Q92685 438 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 MS4A14Q96JA4 679 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 ZNF558Q96NG5 402 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 TTPALQ9BTX7 342 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 HTATIP2Q9BUP3 242 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 TUBB2BQ9BVA1 445 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 CSNK1G1Q9HCP0 422 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 CYLDQ9NQC7 956 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 SMARCAL1Q9NZC9 954 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 IP6K2Q9UHH9 426 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 TMEM59LQ9UK28 342 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 HHLA1C9JL84 531 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 F8VP50 259 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 TBC1D4O60343 1298 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 CYP2F1P24903 491 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 HTRA4P83105 476 aaPredicted RBP16.24■□□□□ 0.19
GYPC-205ENST00000464053 ADIGQ0VDE8 80 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 MAPRE1Q15691 268 aaKnown RBP16.24■□□□□ 0.19
GYPC-205ENST00000464053 WHAMMP3Q1A5X7 153 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 ZNF280DQ6N043 979 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 PSRC1Q6PGN9 363 aaPredicted RBP16.24■□□□□ 0.19
GYPC-205ENST00000464053 KCTD13Q8WZ19 329 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 USTQ9Y2C2 406 aa16.24■□□□□ 0.19
GYPC-205ENST00000464053 SLU7O95391 586 aaKnown RBP16.23■□□□□ 0.19
GYPC-205ENST00000464053 TCF4P15884 667 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 SLC1A1P43005 524 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 ACADSBP45954 432 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 PEX5P50542 639 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 TAS2R40P59535 323 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 ADCY1Q08828 1119 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 COL13A1Q5TAT6 717 aaPredicted RBP16.23■□□□□ 0.19
GYPC-205ENST00000464053 SPATA2LQ8IUW3 424 aaPredicted RBP16.23■□□□□ 0.19
GYPC-205ENST00000464053 DCP1BQ8IZD4 617 aaKnown RBP16.23■□□□□ 0.19
GYPC-205ENST00000464053 HERVK_113Q902F9 699 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 DPF3Q92784 378 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 PGLYRP2Q96PD5 576 aa16.23■□□□□ 0.19
GYPC-205ENST00000464053 OR6C75A6NL08 312 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 LINC00271P0C7V0 271 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 LAG3P18627 525 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 PSMA2P25787 234 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 CTNNA1P35221 906 aaKnown RBP16.22■□□□□ 0.19
GYPC-205ENST00000464053 FLT3P36888 993 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 TKTL1P51854 596 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 ARPP19P56211 112 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 SNX16P57768 344 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 USP41Q3LFD5 358 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 C4orf50Q6ZRC1 276 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 ZDHHC17Q8IUH5 632 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 ARFGAP1Q8N6T3 406 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 MYRIPQ8NFW9 859 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 ABHD8Q96I13 439 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 LRRC4Q9HBW1 653 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 CHST7Q9NS84 486 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 ABI2Q9NYB9 513 aaPredicted RBP16.22■□□□□ 0.19
GYPC-205ENST00000464053 C2CD4BA6NLJ0 364 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 MIF4GDA9UHW6 222 aaKnown RBP16.22■□□□□ 0.19
GYPC-205ENST00000464053 CTNNA2P26232 953 aa16.22■□□□□ 0.19
GYPC-205ENST00000464053 MAN1A1P33908 653 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms