RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 KCNB1Q14721 858 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 MDH1BQ5I0G3 518 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 FSTL4Q6MZW2 842 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 GRAMD1CQ8IYS0 662 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 ARL14EPQ8N8R7 260 aaPredicted RBP15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 OR6B3Q8NGW1 331 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 PARD3BQ8TEW8 1205 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 ATP2A3Q93084 1043 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 ELOVL4Q9GZR5 314 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 ECT2Q9H8V3 914 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 EXOC1Q9NV70 894 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 DUS2Q9NX74 493 aaKnown RBP15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 TRPM5Q9NZQ8 1165 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 NME7Q9Y5B8 376 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 NCOR2Q9Y618 2525 aa15.32■□□□□ 0.04
SNRNP40-203ENST00000463988 PTPRDP23468 1912 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 GREB1Q4ZG55 1949 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 CCDC163A0A0D9SF12 145 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 C2orf78A6NCI8 922 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 PRR5-ARHGAP8B1AHC4 643 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 PDXKO00764 312 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 HRO43593 1189 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 PHACTR2O75167 634 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 RETP07949 1114 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 PFKFB1P16118 471 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 TGM1P22735 817 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 GJA4P35212 333 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 ARHGAP8P85298 464 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 LMNB2Q03252 620 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 DMWDQ09019 674 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 SIM2Q14190 667 aaPredicted RBP15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 FBXO43Q4G163 708 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 WDR5BQ86VZ2 330 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 KIAA0895Q8NCT3 520 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 C2orf42Q9NWW7 574 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 HPSEQ9Y251 543 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
SNRNP40-203ENST00000463988 ZNF840PA6NDX5 716 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 A8MXQ7 604 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 F8VP50 259 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 IFNAR2P48551 515 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 GALK1P51570 392 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 USP46P62068 366 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 NR1H3Q13133 447 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 EML3Q32P44 896 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 DGLUCYQ7Z3D6 616 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 B3GALNT2Q8NCR0 500 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 PLEKHO2Q8TD55 490 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 SH3RF2Q8TEC5 729 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 P2RY13Q9BPV8 354 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 KCTD10Q9H3F6 313 aa15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
SNRNP40-203ENST00000463988 DNAH14Q0VDD8 3507 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 FAM237AA0A1B0GTK4 181 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 A0A1B0GVL5 298 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 LRRIQ3A6PVS8 624 aaPredicted RBP15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 OLFM2O95897 454 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 C4BPAP04003 597 aaKnown RBP15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 RPN1P04843 607 aaKnown RBP15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 CASP4P49662 377 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 KRT85P78386 507 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 SLC7A9P82251 487 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 BIRC3Q13489 604 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 NCOA4Q13772 614 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 RSPO4Q2I0M5 234 aaPredicted RBP15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 ZNF699Q32M78 642 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 ZNF667Q5HYK9 610 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 PRR23BQ6ZRT6 265 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 CAMKK1Q8N5S9 505 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 CCDC26Q8TAB7 109 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 TMC2Q8TDI7 906 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 TNIP3Q96KP6 325 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 SPATA32Q96LK8 384 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 B3GNT5Q9BYG0 378 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 DPEP3Q9H4B8 488 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 FBRSL1Q9HCM7 1045 aaKnown RBP15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 WNT6Q9Y6F9 365 aa15.29■□□□□ 0.04
SNRNP40-203ENST00000463988 ATP8B3O60423 1300 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 IKBKBO14920 756 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 RNF40O75150 1001 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 RTN3O95197 1032 aaPredicted RBP15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 KIF20AO95235 890 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 NFATC1O95644 943 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 EGFP01133 1207 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 NR3C1P04150 777 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 P4HA1P13674 534 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 SGSM1Q2NKQ1 1148 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 HEATR6Q6AI08 1181 aaKnown RBP15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 PKN3Q6P5Z2 889 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 OVCA2Q8WZ82 227 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 TAF4BQ92750 862 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 CD101Q93033 1021 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 ZNF518BQ9C0D4 1074 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 PARD6AQ9NPB6 346 aa15.28■□□□□ 0.04
SNRNP40-203ENST00000463988 TMEM30AQ9NV96 361 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms