RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ATOH1Q92858 354 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-202ENST00000463440 SMARCD1Q96GM5 515 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 FAXDC2Q96IV6 333 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 LRRC3BQ96PB8 259 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 TTLL2Q9BWV7 592 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 TRPM5Q9NZQ8 1165 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 PIAS3Q9Y6X2 628 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 GREB1Q4ZG55 1949 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 OBSL1O75147 1896 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 PPP1R3GB7ZBB8 358 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 ARNTLO00327 626 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 RTN3O95197 1032 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-202ENST00000463440 USP17L7P0C7H9 530 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 BMP6P22004 513 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 PDE6CP51160 858 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 MLLT6P55198 1093 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-202ENST00000463440 USP46P62068 366 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 ORC1Q13415 861 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 ZNF268Q14587 947 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-202ENST00000463440 CCDC40Q4G0X9 1142 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 FOXR2Q6PJQ5 311 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 FRMD5Q7Z6J6 570 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 FILIP1Q7Z7B0 1213 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 NUP93Q8N1F7 819 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 TTC39CQ8N584 583 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 TRIML1Q8N9V2 468 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 SEMA4DQ92854 862 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 USP13Q92995 863 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-202ENST00000463440 MSANTD3Q96H12 275 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 SLITRK1Q96PX8 696 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 NT5C1AQ9BXI3 368 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 C8orf33Q9H7E9 229 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-202ENST00000463440 DMAP1Q9NPF5 467 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-202ENST00000463440 TMEM30AQ9NV96 361 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 DLGAP2Q9P1A6 1054 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 HMGXB4Q9UGU5 601 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 CTNND2Q9UQB3 1225 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 ZNF638Q14966 1978 aaKnown RBP17.24■□□□□ 0.35
COL1A1-202ENST00000463440 WDFY4Q6ZS81 3184 aa17.24■□□□□ 0.35
COL1A1-202ENST00000463440 TICRRQ7Z2Z1 1910 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 AP1G2O75843 785 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 CKMP06732 381 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 PFKLP17858 780 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 CD58P19256 250 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 MAGEA9P43362 315 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 KPNA1P52294 538 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-202ENST00000463440 ANGPT1Q15389 498 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 CAMK4Q16566 473 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 TTI2Q6NXR4 508 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 CC2D1AQ6P1N0 951 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-202ENST00000463440 C1orf228Q6PIY5 440 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 PAQR9Q6ZVX9 377 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 FUKQ8N0W3 1084 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 SLC2A14Q8TDB8 520 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 FAM3CQ92520 227 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 ZFYVE19Q96K21 471 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 DUSP9Q99956 384 aaKnown RBP17.23■□□□□ 0.35
COL1A1-202ENST00000463440 KRT82Q9NSB4 513 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 KIAA1468Q9P260 1216 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 CCL26Q9Y258 94 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 COQ4Q9Y3A0 265 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 MTF2Q9Y483 593 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-202ENST00000463440 MIA3Q5JRA6 1907 aa17.23■□□□□ 0.35
COL1A1-202ENST00000463440 C2orf78A6NCI8 922 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 LRRN2O75325 713 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 CILPO75339 1184 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 CCDC130P13994 396 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 HDCP19113 662 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
COL1A1-202ENST00000463440 YWHAQP27348 245 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 IFRD2Q12894 506 aaPredicted RBP17.22■□□□□ 0.35
COL1A1-202ENST00000463440 TAF10Q12962 218 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 PAK1Q13153 545 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 CBWD6Q4V339 395 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 CBWD3Q5JTY5 395 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 CBWD5Q5RIA9 395 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 ARL14EPQ8N8R7 260 aaPredicted RBP17.22■□□□□ 0.35
COL1A1-202ENST00000463440 C12orf29Q8N999 325 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 PDZD8Q8NEN9 1154 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 SLC35C1Q96A29 364 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 CYP2S1Q96SQ9 504 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 KCNK16Q96T55 309 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 GKN1Q9NS71 199 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 FAM49BQ9NUQ9 324 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 NDRG2Q9UN36 371 aaKnown RBP17.22■□□□□ 0.35
COL1A1-202ENST00000463440 COL4A3Q01955 1670 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 CACNA1HO95180 2353 aa17.22■□□□□ 0.35
COL1A1-202ENST00000463440 COL4A2P08572 1712 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 ZNF840PA6NDX5 716 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 ABL1P00519 1130 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 FAM200BP0CF97 657 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 ADORA2BP29275 332 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 ITPRIPL2Q3MIP1 535 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 RALGPS2Q86X27 583 aaPredicted RBP17.21■□□□□ 0.35
COL1A1-202ENST00000463440 OVCA2Q8WZ82 227 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 FBXO32Q969P5 355 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 CLDN23Q96B33 292 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 CYFIP2Q96F07 1278 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 TWNKQ96RR1 684 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms