RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 DPP3Q9NY33 737 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 ABI2Q9NYB9 513 aaPredicted RBP8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 DSEQ9UL01 958 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 FASNP49327 2511 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 PTPRJQ12913 1337 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 GOLGA8IPA6NC78 632 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 GOLGA8JA6NMD2 632 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 AXIN1O15169 862 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 HCRTO43612 131 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 FOXD2O60548 495 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 RNF40O75150 1001 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 GADD45BO75293 160 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 AKAP3O75969 853 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 NOL4O94818 638 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 RPN1P04843 607 aaKnown RBP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 MYL1P05976 194 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZNF806P0C7X5 589 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 DDX6P26196 483 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZNF268Q14587 947 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZNF77Q15935 545 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 AASDHQ4L235 1098 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 N4BP2L1Q5TBK1 243 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 SDHAF4Q5VUM1 108 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 TXNDC8Q6A555 127 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 TCEAL6Q6IPX3 200 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 CACNA2D4Q7Z3S7 1137 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 CBWD2Q8IUF1 395 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 NELFCDQ8IXH7 590 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 SYCP3Q8IZU3 236 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 PDCL2Q8N4E4 241 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 TCEAL3Q969E4 200 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 LOXL4Q96JB6 756 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZC3H10Q96K80 434 aaKnown RBP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 HHIPQ96QV1 700 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 SLC22A12Q96S37 553 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 GZF1Q9H116 711 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 KCTD10Q9H3F6 313 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 KIF9Q9HAQ2 790 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 TDP1Q9NUW8 608 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 EXOC1Q9NV70 894 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 HSPBP1Q9NZL4 362 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZMYM5Q9UJ78 669 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 L1RE1Q9UN81 338 aa8.5□□□□□ -1.05
CDC42BPA-210ENST00000462553 KPNA7A9QM74 516 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 CLIC2O15247 247 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 RHOBTB3O94955 611 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 IL18RAPO95256 599 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 GJA4P35212 333 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 AVPR1AP37288 418 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 MPLP40238 635 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 SHC2P98077 582 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 SMARCB1Q12824 385 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 GRSF1Q12849 480 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 PNOCQ13519 176 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 SV2CQ496J9 727 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 PLK5Q496M5 336 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 STPG1Q5TH74 334 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 LMBRD2Q68DH5 695 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 STXBP4Q6ZWJ1 553 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 MON1AQ86VX9 555 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 OSTM1Q86WC4 334 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 METTL23Q86XA0 190 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 C12orf56Q8IXR9 622 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 THEM5Q8N1Q8 247 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 GPD1LQ8N335 351 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 C1orf127Q8N9H9 656 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 PLEKHO2Q8TD55 490 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 TRMT2BQ96GJ1 504 aaKnown RBP8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZNF560Q96MR9 790 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 PI4K2AQ9BTU6 479 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 DUSP15Q9H1R2 295 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 THG1LQ9NWX6 298 aaKnown RBP8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 RBAKQ9NYW8 714 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 PCDHB5Q9Y5E4 795 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 PCDHGA5Q9Y5G8 931 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 PCDH15Q96QU1 1955 aa8.49□□□□□ -1.05
CDC42BPA-210ENST00000462553 ANTXRLA6NF34 631 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 SOBPA7XYQ1 873 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 DCLK1O15075 740 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 KIAA0391O15091 583 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 PRPF40AO75400 957 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 LDHAP00338 332 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 ITGB3P05106 788 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 CSH1P0DML2 217 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 CSH2P0DML3 217 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 CCDC192P0DO97 292 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 DRD1P21728 446 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 ACAT1P24752 427 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 CYP2F1P24903 491 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 POLR2BP30876 1174 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 GALK1P51570 392 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 CYP2J2P51589 502 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 SNRPFP62306 86 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 FAM160A1Q05DH4 1040 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 CYP24A1Q07973 514 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 BFSP1Q12934 665 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 PSMD2Q13200 908 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 KCNB1Q14721 858 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 MTF1Q14872 753 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 PDGFRLQ15198 375 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms