RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CUL9Q8IWT3 2517 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 PRR33A8MZF0 331 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 TISP43B9A030 160 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 PDXKO00764 312 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 HNRNPDLO14979 420 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 MAPK13O15264 365 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 OGTO15294 1046 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 CLDN3O15551 220 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 DDHD2O94830 711 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 NPTXRO95502 500 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 C1RP00736 705 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 RPN1P04843 607 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 GALTP07902 379 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 CLTAP09496 248 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 LAG3P18627 525 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 LRPAP1P30533 357 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 RPS26P62854 115 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 ASIC1P78348 528 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 NCBP1Q09161 790 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 DHX8Q14562 1220 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 NKG7Q16617 165 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 ZNF568Q3ZCX4 644 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 ZBTB41Q5SVQ8 909 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 SLFN12LQ6IEE8 588 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 CENPPQ6IPU0 288 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 GLB1LQ6UWU2 654 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 LIMS2Q7Z4I7 341 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 TMEM173Q86WV6 379 aaPredicted RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 CDR2LQ86X02 465 aaPredicted RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 NT5DC4Q86YG4 428 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 ZNF280BQ86YH2 543 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 BRSK2Q8IWQ3 736 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 SLC39A11Q8N1S5 342 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 MFSD4AQ8N468 514 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 FIBCD1Q8N539 461 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 COLGALT1Q8NBJ5 622 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 RASSF8Q8NHQ8 419 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 SPPL3Q8TCT6 385 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 GPT2Q8TD30 523 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 LPPQ93052 612 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 HPS3Q969F9 1004 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 BORCS6Q96GS4 357 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 FAM84AQ96KN4 292 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 ZMAT2Q96NC0 199 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 ACCSQ96QU6 501 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 YME1L1Q96TA2 773 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 GAD1Q99259 594 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 ADPGKQ9BRR6 497 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 C17orf80Q9BSJ5 609 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 VN1R3Q9BXE9 311 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 GTPBP4Q9BZE4 634 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 GBP3Q9H0R5 595 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 LMAN2LQ9H0V9 348 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 BLZF1Q9H2G9 400 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 ASB7Q9H672 318 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 NRDE2Q9H7Z3 1164 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 TMEM206Q9H813 350 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 MRPL44Q9H9J2 332 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 SLC28A3Q9HAS3 691 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 AGPAT3Q9NRZ7 376 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 TYW1Q9NV66 732 aaKnown RBP6.24□□□□□ -1.41
VPS36-202ENST00000462289 MARCH5Q9NX47 278 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 DERAQ9Y315 318 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 ST14Q9Y5Y6 855 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 NOTCH4Q99466 2003 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 C2orf16Q68DN1 1984 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 A0A0C4DFX4 3053 aa6.24□□□□□ -1.41
VPS36-202ENST00000462289 DOCK6Q96HP0 2047 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 GREB1Q4ZG55 1949 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 DENND4CQ5VZ89 1909 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 C5orf42Q9H799 3197 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 SMIM28A0A1B0GU29 152 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 ANO9A1A5B4 782 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 PRPF6O94906 941 aaKnown RBP6.23□□□□□ -1.41
VPS36-202ENST00000462289 GCNT3O95395 438 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 ITGB1P05556 798 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 KRT18P05783 430 aaKnown RBP6.23□□□□□ -1.41
VPS36-202ENST00000462289 ITGA4P13612 1032 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 IDEP14735 1019 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 CYP3A5P20815 502 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 DNAJB1P25685 340 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 GNA15P30679 374 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 PPM1AP35813 382 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 MLH1P40692 756 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 AFMP43652 599 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 STRN3Q13033 797 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 TUSC3Q13454 348 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 PNOCQ13519 176 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 MORC3Q14149 939 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 BTG3Q14201 252 aaPredicted RBP6.23□□□□□ -1.41
VPS36-202ENST00000462289 KCNMB1Q16558 191 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 UPP1Q16831 310 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 KNOP1Q1ED39 458 aaKnown RBP6.23□□□□□ -1.41
VPS36-202ENST00000462289 EDRF1Q3B7T1 1238 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 SFRP5Q5T4F7 317 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 ZNF658Q5TYW1 1059 aaPredicted RBP6.23□□□□□ -1.41
VPS36-202ENST00000462289 KCNT2Q6UVM3 1135 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms