RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 HDAC7Q8WUI4 952 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 CPA5Q8WXQ8 436 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 SPATA17Q96L03 361 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 B3GALT6Q96L58 329 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 TRIM62Q9BVG3 475 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 NKX2-4Q9H2Z4 354 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 SYNCQ9H7C4 482 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 LRRC4Q9HBW1 653 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 MRPL47Q9HD33 250 aaKnown RBP11.27□□□□□ -0.61
RTF1-202ENST00000462276 ALG13Q9NP73 1137 aaKnown RBP11.27□□□□□ -0.61
RTF1-202ENST00000462276 KRT82Q9NSB4 513 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 PARVAQ9NVD7 372 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 TMEM51Q9NW97 253 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 UVRAGQ9P2Y5 699 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
RTF1-202ENST00000462276 PPP2R2CQ9Y2T4 447 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.26□□□□□ -0.61
RTF1-202ENST00000462276 MTMR11A4FU01 709 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 CLDN5O00501 218 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 GRM6O15303 877 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 TUBB4AP04350 444 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 CNPP09543 421 aaKnown RBP11.26□□□□□ -0.61
RTF1-202ENST00000462276 HAPLN1P10915 354 aaPredicted RBP11.26□□□□□ -0.61
RTF1-202ENST00000462276 BDNFP23560 247 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 GRIK1P39086 918 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 GALCP54803 685 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 ARPP19P56211 112 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 ERVFC1P60507 584 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 PLD1Q13393 1074 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 RNF19BQ6ZMZ0 732 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 CLEC20AQ6ZU45 233 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 CCDC149Q6ZUS6 474 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 MON1BQ7L1V2 547 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 ARCQ7LC44 396 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 PIGZQ86VD9 579 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 PALB2Q86YC2 1186 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 PASD1Q8IV76 773 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 TCEAL8Q8IYN2 117 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 ATAD1Q8NBU5 361 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 KLHL5Q96PQ7 755 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 TMEM209Q96SK2 561 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 CDCA3Q99618 268 aaPredicted RBP11.26□□□□□ -0.61
RTF1-202ENST00000462276 FBXO44Q9H4M3 255 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 PLEKHA4Q9H4M7 779 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 CNGB3Q9NQW8 809 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 TMLHEQ9NVH6 421 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 ABI2Q9NYB9 513 aaPredicted RBP11.26□□□□□ -0.61
RTF1-202ENST00000462276 LMCD1Q9NZU5 365 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 REXO2Q9Y3B8 237 aaKnown RBP11.26□□□□□ -0.61
RTF1-202ENST00000462276 SCINQ9Y6U3 715 aa11.26□□□□□ -0.61
RTF1-202ENST00000462276 TDRD15B5MCY1 1934 aaKnown RBP11.26□□□□□ -0.61
RTF1-202ENST00000462276 A0A0C4DFX4 3053 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 WDR27A2RRH5 827 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 TMCO5BA8MYB1 307 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ARHGEF15O94989 841 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 RTN3O95197 1032 aaPredicted RBP11.25□□□□□ -0.61
RTF1-202ENST00000462276 CALCAP01258 141 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 CYP1A2P05177 515 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 GLI1P08151 1106 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 CFHP08603 1231 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 OR4Q2P0C623 313 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 CYP2F1P24903 491 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 MSNP26038 577 aaKnown RBP11.25□□□□□ -0.61
RTF1-202ENST00000462276 KLRC2P26717 231 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ALDH1A3P47895 512 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 HADHBP55084 474 aaKnown RBP11.25□□□□□ -0.61
RTF1-202ENST00000462276 MAP3K7CLP57077 242 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ADCY1Q08828 1119 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 PTP4A2Q12974 167 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 DUSP4Q13115 394 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 PTPN20Q4JDL3 420 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ARHGAP29Q52LW3 1261 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 RAB41Q5JT25 222 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 PLEKHA7Q6IQ23 1121 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 PMF1Q6P1K2 205 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 LILRA6Q6PI73 481 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 BEND5Q7L4P6 421 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 CCAR2Q8N163 923 aaKnown RBP11.25□□□□□ -0.61
RTF1-202ENST00000462276 SIX6OS1Q8N1H7 587 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 C3orf20Q8ND61 904 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ACRBPQ8NEB7 543 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ARNTL2Q8WYA1 636 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 RFFLQ8WZ73 363 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 IRGQQ8WZA9 623 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 CPXM1Q96SM3 734 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 SMOQ99835 787 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 LPIN3Q9BQK8 851 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ST7Q9NRC1 585 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ASNSD1Q9NWL6 643 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 TAS2R14Q9NYV8 317 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 MTUS1Q9ULD2 1270 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 PYCARDQ9ULZ3 195 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 ASB3Q9Y575 518 aa11.25□□□□□ -0.61
RTF1-202ENST00000462276 COL6A3P12111 3177 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 F8VP50 259 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 PRRG1O14668 218 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 ADAM12O43184 909 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 MTA2O94776 668 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 GLUD1P00367 558 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms