RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ZNF720Q7Z2F6 126 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 SPATA2LQ8IUW3 424 aaPredicted RBP11.63□□□□□ -0.55
CBX3-205ENST00000462165 BRSK2Q8IWQ3 736 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 SCN4BQ8IWT1 228 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 CCDC33Q8N5R6 958 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 KIAA1958Q8N8K9 716 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 CXorf38Q8TB03 319 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 LARP4BQ92615 738 aaKnown RBP11.63□□□□□ -0.55
CBX3-205ENST00000462165 SPACA7Q96KW9 195 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 STRA6Q9BX79 667 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 IKZF4Q9H2S9 585 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 SLC32A1Q9H598 525 aa11.63□□□□□ -0.55
CBX3-205ENST00000462165 ITPR1Q14643 2758 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 GON4LQ3T8J9 2241 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 UPK3BL1B0FP48 263 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 UPK3BL2E5RIL1 263 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 CYP17A1P05093 508 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 ENGP17813 658 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 EIF2DP41214 584 aaKnown RBP11.62□□□□□ -0.55
CBX3-205ENST00000462165 DPP6P42658 865 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 TFAMQ00059 246 aaKnown RBP11.62□□□□□ -0.55
CBX3-205ENST00000462165 HSF5Q4G112 596 aaPredicted RBP11.62□□□□□ -0.55
CBX3-205ENST00000462165 SPDYCQ5MJ68 293 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 SCARA3Q6AZY7 606 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 SLC23A3Q6PIS1 610 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 LPCAT2Q7L5N7 544 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 SYT12Q8IV01 421 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 ADGRF2Q8IZF7 708 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 ADGRG2Q8IZP9 1017 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 TOP6BLQ8N6T0 577 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 KRI1Q8N9T8 703 aaKnown RBP11.62□□□□□ -0.55
CBX3-205ENST00000462165 IL17RCQ8NAC3 791 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 TXNDC5Q8NBS9 432 aaKnown RBP11.62□□□□□ -0.55
CBX3-205ENST00000462165 WHAMMQ8TF30 809 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 CACTINQ8WUQ7 758 aaKnown RBP11.62□□□□□ -0.55
CBX3-205ENST00000462165 RLN3Q8WXF3 142 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 ZCCHC14Q8WYQ9 949 aaKnown RBP11.62□□□□□ -0.55
CBX3-205ENST00000462165 SPATA17Q96L03 361 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 CEP295NLQ96MC4 621 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 FNBP1Q96RU3 617 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 KIF2CQ99661 725 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 TMEM74BQ9NUR3 256 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 ITGA11Q9UKX5 1188 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 MSRB2Q9Y3D2 182 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 SNX9Q9Y5X1 595 aa11.62□□□□□ -0.55
CBX3-205ENST00000462165 PCDH15Q96QU1 1955 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 A0A0A0MRY4 1105 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 MYMKA6NI61 221 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 SGK1O00141 431 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 LEFTY2O00292 366 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 HCRTO43612 131 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 HYAL3O43820 417 aaPredicted RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 LDHAP00338 332 aaKnown RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 DDIT3P35638 169 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 LONP1P36776 959 aaKnown RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 PTGER3P43115 390 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 SLC7A9P82251 487 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 RING1Q06587 406 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 SEMA3BQ13214 749 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 DHCR24Q15392 516 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 PEAR1Q5VY43 1037 aaPredicted RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 LMBRD2Q68DH5 695 aaPredicted RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 KIAA1211LQ6NV74 962 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 LRSAM1Q6UWE0 723 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 VSTM1Q6UX27 236 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 C4orf50Q6ZRC1 276 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 DENND5BQ6ZUT9 1274 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 DPH6Q7L8W6 267 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 LIMS2Q7Z4I7 341 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 FILIP1Q7Z7B0 1213 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 PIP4P1Q86T03 277 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 TTC30AQ86WT1 665 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 SFR1Q86XK3 245 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 TMEFF1Q8IYR6 380 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 CSGALNACT2Q8N6G5 542 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 ALLCQ8N6M5 410 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 ZSWIM2Q8NEG5 633 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 PNKPQ96T60 521 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 FAM213AQ9BRX8 229 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 POLMQ9NP87 494 aaPredicted RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 RBAKQ9NYW8 714 aaPredicted RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 TRPM5Q9NZQ8 1165 aa11.61□□□□□ -0.55
CBX3-205ENST00000462165 MAGEC2Q9UBF1 373 aaPredicted RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 MBD1Q9UIS9 605 aaPredicted RBP11.61□□□□□ -0.55
CBX3-205ENST00000462165 FAM221BA6H8Z2 402 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 H0Y626 953 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 SLC9A3R1O14745 358 aaPredicted RBP11.6□□□□□ -0.55
CBX3-205ENST00000462165 MAP3K13O43283 966 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 ATP2C2O75185 946 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 KAT7O95251 611 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 TRIM16O95361 564 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 KLF8O95600 359 aaPredicted RBP11.6□□□□□ -0.55
CBX3-205ENST00000462165 OLFM2O95897 454 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 APODP05090 189 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 GARTP22102 1010 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 BDNFP23560 247 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 HOXD12P35452 270 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 TIE1P35590 1138 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms