RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 TRPC7Q9HCX4 862 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 THG1LQ9NWX6 298 aaKnown RBP16.37■□□□□ 0.21
VARS-219ENST00000461328 TICRRQ7Z2Z1 1910 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 COL4A2P08572 1712 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 SHISA7A6NL88 538 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 SOBPA7XYQ1 873 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 LAMTOR5O43504 91 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 TADA3O75528 432 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 CD58P19256 250 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 BMP6P22004 513 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 ASPAP45381 313 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 NDST1P52848 882 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 STX17P56962 302 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 WDR44Q5JSH3 913 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 ACOT1Q86TX2 421 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 MON1AQ86VX9 555 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 TRIML1Q8N9V2 468 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 FBXL13Q8NEE6 735 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 CLDN23Q96B33 292 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 SPATA17Q96L03 361 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 CEP295NLQ96MC4 621 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 GBP4Q96PP9 640 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 DNAI2Q9GZS0 605 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 APOBEC3GQ9HC16 384 aaKnown RBP16.36■□□□□ 0.21
VARS-219ENST00000461328 METTL14Q9HCE5 456 aaKnown RBP16.36■□□□□ 0.21
VARS-219ENST00000461328 KIAA1468Q9P260 1216 aa16.36■□□□□ 0.21
VARS-219ENST00000461328 PPP1R3GB7ZBB8 358 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 F8VP50 259 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 CLDN5O00501 218 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 RPS9P46781 194 aaKnown RBP16.35■□□□□ 0.21
VARS-219ENST00000461328 MLLT6P55198 1093 aaPredicted RBP16.35■□□□□ 0.21
VARS-219ENST00000461328 IFRD2Q12894 506 aaPredicted RBP16.35■□□□□ 0.21
VARS-219ENST00000461328 TTI2Q6NXR4 508 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 C1orf228Q6PIY5 440 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 FAM35AQ86V20 835 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 TTC8Q8TAM2 541 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 USP13Q92995 863 aaPredicted RBP16.35■□□□□ 0.21
VARS-219ENST00000461328 NKD2Q969F2 451 aaPredicted RBP16.35■□□□□ 0.21
VARS-219ENST00000461328 B3GNT5Q9BYG0 378 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 C8orf33Q9H7E9 229 aaPredicted RBP16.35■□□□□ 0.21
VARS-219ENST00000461328 KIF9Q9HAQ2 790 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 CYP3A43Q9HB55 503 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 FAM49BQ9NUQ9 324 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 TDP1Q9NUW8 608 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 EHD2Q9NZN4 543 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 HMGXB4Q9UGU5 601 aa16.35■□□□□ 0.21
VARS-219ENST00000461328 TRAV19A0A0A6YYK7 116 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 CKMP06732 381 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 SP9P0CG40 484 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 CCDC130P13994 396 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 SOX9P48436 509 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 CBWD6Q4V339 395 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 CBWD3Q5JTY5 395 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 CBWD5Q5RIA9 395 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 DENND5BQ6ZUT9 1274 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 UNC93AQ86WB7 457 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 SEMA4DQ92854 862 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 SMARCD1Q96GM5 515 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 IPO9Q96P70 1041 aaKnown RBP16.34■□□□□ 0.21
VARS-219ENST00000461328 DUSP9Q99956 384 aaKnown RBP16.34■□□□□ 0.21
VARS-219ENST00000461328 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 CLSTN2Q9H4D0 955 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 GKN1Q9NS71 199 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 KRT82Q9NSB4 513 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 RAB20Q9NX57 234 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 GTSE1Q9NYZ3 720 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 CCL26Q9Y258 94 aa16.34■□□□□ 0.21
VARS-219ENST00000461328 PRR23AA6NEV1 266 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 SPECC1L-ADORA2AF8WAN1 911 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 GOLGA6L22H0YM25 854 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 AP1G2O75843 785 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 USP17L7P0C7H9 530 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 USP46P62068 366 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 TNK2Q07912 1038 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 FZD5Q13467 585 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 ZNF268Q14587 947 aaPredicted RBP16.33■□□□□ 0.2
VARS-219ENST00000461328 CC2D1AQ6P1N0 951 aaPredicted RBP16.33■□□□□ 0.2
VARS-219ENST00000461328 ZC3H14Q6PJT7 736 aaKnown RBP16.33■□□□□ 0.2
VARS-219ENST00000461328 ASCL5Q7RTU5 278 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 FILIP1Q7Z7B0 1213 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 RALGPS2Q86X27 583 aaPredicted RBP16.33■□□□□ 0.2
VARS-219ENST00000461328 TTC16Q8NEE8 873 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 C8orf48Q96LL4 319 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 NT5C1AQ9BXI3 368 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 LMAN1LQ9HAT1 526 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 DMAP1Q9NPF5 467 aaPredicted RBP16.33■□□□□ 0.2
VARS-219ENST00000461328 FBXO4Q9UKT5 387 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 R4GN57 208 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 OBSL1O75147 1896 aa16.33■□□□□ 0.2
VARS-219ENST00000461328 FGFR1OPO95684 399 aaKnown RBP16.32■□□□□ 0.2
VARS-219ENST00000461328 GNA14O95837 355 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 ADORA2BP29275 332 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 CTHP32929 405 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 PDE6CP51160 858 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 CACNA2D1P54289 1103 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 CSTF1Q05048 431 aaKnown RBP16.32■□□□□ 0.2
VARS-219ENST00000461328 INCA1Q0VD86 236 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 MTAPQ13126 283 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 LRRC32Q14392 662 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms