RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 RBM12Q9NTZ6 932 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-211ENST00000460558 MAP3K20Q9NYL2 800 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-211ENST00000460558 ANKMY1Q9P2S6 941 aa4.55□□□□□ -1.68
ECHDC1-211ENST00000460558 ATP8A1Q9Y2Q0 1164 aa4.55□□□□□ -1.68
ECHDC1-211ENST00000460558 PAXBP1Q9Y5B6 917 aa4.55□□□□□ -1.68
ECHDC1-211ENST00000460558 MYO18AQ92614 2054 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-211ENST00000460558 SVILO95425 2214 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 HELZP42694 1942 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 A0A0U1RQF3 1178 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 MEFVO15553 781 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 TGM5O43548 720 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 NPTXRO95502 500 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 SOD2P04179 222 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 HNRNPA1P09651 372 aaKnown RBP eCLIP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 GNAT2P19087 354 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 CCNE1P24864 410 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 MAP4P27816 1152 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 SLC11A1P49279 550 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 GLUD2P49448 558 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 CDKN1CP49918 316 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 CRYBB1P53674 252 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 MLLT6P55198 1093 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 NTHL1P78549 312 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 CDK5R2Q13319 367 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 PLCB4Q15147 1175 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 C21orf62-AS1Q17RA5 79 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 GPATCH4Q5T3I0 446 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 LIN9Q5TKA1 542 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 GLB1LQ6UWU2 654 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 ADAT2Q7Z6V5 191 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 LRRTM3Q86VH5 581 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 PALB2Q86YC2 1186 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 JAMLQ86YT9 394 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 ERC1Q8IUD2 1116 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 SAMD3Q8N6K7 520 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 ADCY4Q8NFM4 1077 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 ITFG1Q8TB96 612 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 SEPT1Q8WYJ6 367 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 UTP4Q969X6 686 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 ELSPBP1Q96BH3 223 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 IPO9Q96P70 1041 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 INPP4AQ96PE3 977 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 TRMT61BQ9BVS5 477 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 TARS2Q9BW92 718 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 APOL6Q9BWW8 343 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 NUSAP1Q9BXS6 441 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 NACAP1Q9BZK3 213 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 NRDE2Q9H7Z3 1164 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 PRKRIP1Q9H875 184 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 RXFP1Q9HBX9 757 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 EPB41L4AQ9HCS5 686 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 TRPV5Q9NQA5 729 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 TBC1D13Q9NVG8 400 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 C2orf42Q9NWW7 574 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 DACT1Q9NYF0 836 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 GDE1Q9NZC3 331 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 KLHL42Q9P2K6 505 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 IL17BQ9UHF5 180 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 SFMBT1Q9UHJ3 866 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 EVLQ9UI08 416 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 KCNH3Q9ULD8 1083 aa4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 NOB1Q9ULX3 412 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 APOBEC2Q9Y235 224 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 NUP210Q8TEM1 1887 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-211ENST00000460558 ZMYM2Q9UBW7 1377 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 SPG11Q96JI7 2443 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PCDH15Q96QU1 1955 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 FAM95CA0A1B0GW59 222 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PATE3B3GLJ2 98 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 EXTL3O43909 919 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 DHX16O60231 1041 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 RANBP6O60518 1105 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 BCAR3O75815 825 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 KCNH1O95259 989 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 CPP00450 1065 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 CHGBP05060 677 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 FTH1P19P0C7X4 201 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 C6P13671 934 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PSMC3P17980 439 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 ITPKBP27987 946 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 GDI1P31150 447 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 HOXA13P31271 388 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 HOXC13P31276 330 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 SOX5P35711 763 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 NOVP48745 357 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 FAM193AP78312 1265 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 GHRHRQ02643 423 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 CREMQ03060 361 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PPARAQ07869 468 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 SF1Q15637 639 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 TRIP6Q15654 476 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 KIZQ2M2Z5 673 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PABPC1LQ4VXU2 614 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 NOMO2Q5JPE7 1267 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 RRP12Q5JTH9 1297 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PPM1LQ5SGD2 360 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 TANGO2Q6ICL3 276 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 MTHFD1LQ6UB35 978 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms