RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 HEXIM2Q96MH2 286 aaKnown RBP23.07■■□□□ 1.28
SSNA1-202ENST00000459860 ZMYM5Q9UJ78 669 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 NUMBLQ9Y6R0 609 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 KMT2EQ8IZD2 1858 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 PATJQ8NI35 1801 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 GCNT1Q02742 428 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 VWA3BQ502W6 1294 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 TCP11X2Q5H9J9 407 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 GPR158Q5T848 1215 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 TMEM105Q8N8V8 129 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 MRPS31Q92665 395 aaKnown RBP23.06■■□□□ 1.28
SSNA1-202ENST00000459860 MYRFLQ96LU7 910 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 HNRNPABQ99729 332 aaKnown RBP23.06■■□□□ 1.28
SSNA1-202ENST00000459860 CRACR2AQ9BSW2 395 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 NDST4Q9H3R1 872 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 IL21Q9HBE4 155 aa23.06■■□□□ 1.28
SSNA1-202ENST00000459860 ZNF638Q14966 1978 aaKnown RBP23.06■■□□□ 1.28
SSNA1-202ENST00000459860 GALR2O43603 387 aaPredicted RBP23.05■■□□□ 1.28
SSNA1-202ENST00000459860 DDX6P26196 483 aaKnown RBP eCLIP23.05■■□□□ 1.28
SSNA1-202ENST00000459860 CYP4F8P98187 520 aa23.05■■□□□ 1.28
SSNA1-202ENST00000459860 EXOC3L4Q17RC7 722 aa23.05■■□□□ 1.28
SSNA1-202ENST00000459860 ANO6Q4KMQ2 910 aa23.05■■□□□ 1.28
SSNA1-202ENST00000459860 PARM1Q6UWI2 310 aa23.05■■□□□ 1.28
SSNA1-202ENST00000459860 ZSCAN18Q8TBC5 510 aaPredicted RBP23.05■■□□□ 1.28
SSNA1-202ENST00000459860 RSAD2Q8WXG1 361 aa23.05■■□□□ 1.28
SSNA1-202ENST00000459860 FGF14Q92915 247 aa23.05■■□□□ 1.28
SSNA1-202ENST00000459860 SMARCD2Q92925 531 aa23.05■■□□□ 1.28
SSNA1-202ENST00000459860 PCDHB4Q9Y5E5 795 aa23.05■■□□□ 1.28
SSNA1-202ENST00000459860 MYO15AQ9UKN7 3530 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 H0Y858 1186 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 RTN3O95197 1032 aaPredicted RBP23.04■■□□□ 1.28
SSNA1-202ENST00000459860 F11P03951 625 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 CACNA2D1P54289 1103 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 RAD23BP54727 409 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 CDKAL1Q5VV42 579 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 TRIM65Q6PJ69 517 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 PAQR9Q6ZVX9 377 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 RRAGAQ7L523 313 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 ENOSF1Q7L5Y1 443 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 ARHGEF19Q8IW93 802 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 NUP93Q8N1F7 819 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 SLC4A11Q8NBS3 891 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 ATOH1Q92858 354 aaPredicted RBP23.04■■□□□ 1.28
SSNA1-202ENST00000459860 ASB16Q96NS5 453 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 KXD1Q9BQD3 176 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 IRF2BPLQ9H1B7 796 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 TASP1Q9H6P5 420 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 ZFP14Q9HCL3 533 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 DUSP12Q9UNI6 340 aa23.04■■□□□ 1.28
SSNA1-202ENST00000459860 MYO16Q9Y6X6 1858 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 CACNA1HO95180 2353 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 ECI2O75521 394 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 CD19P15391 556 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 SLC8A3P57103 927 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 IFRD2Q12894 506 aaPredicted RBP23.03■■□□□ 1.28
SSNA1-202ENST00000459860 FAM78AQ5JUQ0 283 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 TMEM270Q6UE05 265 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 SLC44A3Q8N4M1 653 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 JAKMIP2Q96AA8 810 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 E2F7Q96AV8 911 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 ELSPBP1Q96BH3 223 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 SLITRK1Q96PX8 696 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 KCNK16Q96T55 309 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 FANCLQ9NW38 375 aa23.03■■□□□ 1.28
SSNA1-202ENST00000459860 DMDP11532 3685 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 SYCE3A1L190 88 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 SOBPA7XYQ1 873 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 NRG2O14511 850 aaPredicted RBP23.02■■□□□ 1.28
SSNA1-202ENST00000459860 PPP3CCP48454 512 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 MFAP3P55082 362 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 MAP3K7CLP57077 242 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 SGO2Q562F6 1265 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 STXBP5Q5T5C0 1151 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 PPP1R26Q5T8A7 1209 aaPredicted RBP23.02■■□□□ 1.28
SSNA1-202ENST00000459860 AOPEPQ8N6M6 819 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 UBR7Q8N806 425 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 ST13P5Q8NFI4 369 aaPredicted RBP23.02■■□□□ 1.28
SSNA1-202ENST00000459860 ZSWIM3Q96MP5 696 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 SMOQ99835 787 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 TTLL2Q9BWV7 592 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 CSNK1G1Q9HCP0 422 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 UBE2TQ9NPD8 197 aaPredicted RBP23.02■■□□□ 1.28
SSNA1-202ENST00000459860 TMEM30AQ9NV96 361 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 TAB2Q9NYJ8 693 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 TRPM5Q9NZQ8 1165 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 APEX2Q9UBZ4 518 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 KIAA1257Q9ULG3 409 aa23.02■■□□□ 1.28
SSNA1-202ENST00000459860 SMTNL1A8MU46 457 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 PROB1E7EW31 1015 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 DPYSL4O14531 572 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 GFRA3O60609 400 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 PAEPP09466 180 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 VDRP11473 427 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 SRFP11831 508 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 NPR3P17342 541 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 SLC9A1P19634 815 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 CDK11BP21127 795 aaKnown RBP23.01■■□□□ 1.27
SSNA1-202ENST00000459860 YWHAQP27348 245 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 AVPR1AP37288 418 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 SLC5A3P53794 718 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms