RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 C8orf48Q96LL4 319 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 DMAP1Q9NPF5 467 aaPredicted RBP19.84■□□□□ 0.77
USP39-209ENST00000458268 MAP3K7CLP57077 242 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 FUKQ8N0W3 1084 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 IRF7Q92985 503 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 E2F7Q96AV8 911 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 SHDQ96IW2 340 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 CYP2S1Q96SQ9 504 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 DNAI2Q9GZS0 605 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 TRPV4Q9HBA0 871 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 TRPM5Q9NZQ8 1165 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 CCL26Q9Y258 94 aa19.83■□□□□ 0.77
USP39-209ENST00000458268 TRAV19A0A0A6YYK7 116 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 C2orf78A6NCI8 922 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 CILPO75339 1184 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 FGFR1OPO95684 399 aaKnown RBP19.82■□□□□ 0.76
USP39-209ENST00000458268 DCNP07585 359 aaKnown RBP19.82■□□□□ 0.76
USP39-209ENST00000458268 FAM200BP0CF97 657 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 CCDC192P0DO97 292 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 DDX6P26196 483 aaKnown RBP eCLIP19.82■□□□□ 0.765e-6■■■■■ 34.8
USP39-209ENST00000458268 INCA1Q0VD86 236 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 PAQR9Q6ZVX9 377 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 ARL14EPQ8N8R7 260 aaPredicted RBP19.82■□□□□ 0.76
USP39-209ENST00000458268 BPIFB1Q8TDL5 484 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 FBXO32Q969P5 355 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 CYFIP2Q96F07 1278 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 HEXIM2Q96MH2 286 aaKnown RBP19.82■□□□□ 0.76
USP39-209ENST00000458268 CISHQ9NSE2 258 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 EHD2Q9NZN4 543 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 RWDD2AQ9UIY3 292 aa19.82■□□□□ 0.76
USP39-209ENST00000458268 NDRG2Q9UN36 371 aaKnown RBP19.82■□□□□ 0.76
USP39-209ENST00000458268 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.82■□□□□ 0.76
USP39-209ENST00000458268 HELZP42694 1942 aaKnown RBP19.81■□□□□ 0.76
USP39-209ENST00000458268 GNA14O95837 355 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 AOC1P19801 751 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 KPNA1P52294 538 aaPredicted RBP19.81■□□□□ 0.76
USP39-209ENST00000458268 CETN1Q12798 172 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 TAF10Q12962 218 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 DPCR1Q3MIW9 517 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 HSP90AA4PQ58FG1 418 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 CLEC17AQ6ZS10 378 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 MON1AQ86VX9 555 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 NUP93Q8N1F7 819 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 CRYBG2Q8N1P7 616 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 CELF5Q8N6W0 485 aaKnown RBP19.81■□□□□ 0.76
USP39-209ENST00000458268 USP13Q92995 863 aaPredicted RBP19.81■□□□□ 0.76
USP39-209ENST00000458268 CNOT6LQ96LI5 555 aaKnown RBP19.81■□□□□ 0.76
USP39-209ENST00000458268 MYRFLQ96LU7 910 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 LRRC3BQ96PB8 259 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 SLITRK1Q96PX8 696 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 SLC22A12Q96S37 553 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 SMOQ99835 787 aa19.81■□□□□ 0.76
USP39-209ENST00000458268 BEST1O76090 585 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 AFPP02771 609 aaKnown RBP19.8■□□□□ 0.76
USP39-209ENST00000458268 USP17L7P0C7H9 530 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 CD19P15391 556 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 YWHAQP27348 245 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 SOX9P48436 509 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 CLCN5P51795 746 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 SLC5A3P53794 718 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 KCNH2Q12809 1159 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 CUL2Q13617 745 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 PPM1KQ8N3J5 372 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 MLKLQ8NB16 471 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 PRSS33Q8NF86 280 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 SCAMP5Q8TAC9 235 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 GPT2Q8TD30 523 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 WHAMMQ8TF30 809 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 DNASE1L2Q92874 299 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 NT5C1BQ96P26 610 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 TDP1Q9NUW8 608 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 THG1LQ9NWX6 298 aaKnown RBP19.8■□□□□ 0.76
USP39-209ENST00000458268 SIT1Q9Y3P8 196 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 PIAS3Q9Y6X2 628 aa19.8■□□□□ 0.76
USP39-209ENST00000458268 RTN3O95197 1032 aaPredicted RBP19.79■□□□□ 0.76
USP39-209ENST00000458268 HDCP19113 662 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 MTIF2P46199 727 aaKnown RBP19.79■□□□□ 0.76
USP39-209ENST00000458268 PRKCQQ04759 706 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 TNK2Q07912 1038 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 ARHGAP29Q52LW3 1261 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 PPP1R26Q5T8A7 1209 aaPredicted RBP19.79■□□□□ 0.76
USP39-209ENST00000458268 CC2D1AQ6P1N0 951 aaPredicted RBP19.79■□□□□ 0.76
USP39-209ENST00000458268 TRIM59Q8IWR1 403 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 SMPD4Q9NXE4 827 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 CHORDC1Q9UHD1 332 aaPredicted RBP19.79■□□□□ 0.76
USP39-209ENST00000458268 ZMYM5Q9UJ78 669 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 COL4A2P08572 1712 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 PATJQ8NI35 1801 aa19.79■□□□□ 0.76
USP39-209ENST00000458268 KANSL1LA0AUZ9 987 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 SCAMP3O14828 347 aaKnown RBP19.78■□□□□ 0.76
USP39-209ENST00000458268 CHADO15335 359 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 YWHAEP62258 255 aaKnown RBP19.78■□□□□ 0.76
USP39-209ENST00000458268 TRIM68Q6AZZ1 485 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 SLC4A11Q8NBS3 891 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 ZMIZ2Q8NF64 920 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 PJA1Q8NG27 643 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 FAM122AQ96E09 287 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 TMEM176AQ96HP8 235 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 TTLL2Q9BWV7 592 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 KIF9Q9HAQ2 790 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms