RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 PDGFRLQ15198 375 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 SMAD1Q15797 465 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 C11orf91Q3C1V1 193 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 UAP1L1Q3KQV9 507 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 WWC2Q6AWC2 1192 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ANO5Q75V66 913 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 GPR155Q7Z3F1 870 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 FERMT3Q86UX7 667 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 SGMS1Q86VZ5 419 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 RHPN2Q8IUC4 686 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ARID3BQ8IVW6 561 aaPredicted RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ELMOD1Q8N336 334 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 MDM1Q8TC05 714 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 EZH1Q92800 747 aaPredicted RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 TMEM87BQ96K49 555 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF512Q96ME7 567 aaPredicted RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 CDC6Q99741 560 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 MRPL18Q9H0U6 180 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 NXF3Q9H4D5 531 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 TASP1Q9H6P5 420 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 C7orf69Q9H7B7 122 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 HPS4Q9NQG7 708 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ASAH2Q9NR71 780 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 THG1LQ9NWX6 298 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 BARHL2Q9NY43 387 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 CEP72Q9P209 647 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 BRPF3Q9ULD4 1205 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 POLIQ9UNA4 740 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 CDY1Q9Y6F8 540 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ASCC3Q8N3C0 2202 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 EVPLQ92817 2033 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 TRABD2BA6NFA1 517 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 DDX39AO00148 427 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ADAM11O75078 769 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 LYPLA2O95372 231 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 PLEKHA8P1O95397 391 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 SEC24AO95486 1093 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 EGFP01133 1207 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 THP07101 528 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 H2AFB1P0C5Y9 115 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 H2AFB2P0C5Z0 115 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ARF4P18085 180 aaPredicted RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 PAX3P23760 479 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 DDX6P26196 483 aaKnown RBP eCLIP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ARL2P36404 184 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 CD96P40200 585 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 CCR10P46092 362 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 PSMC5P62195 406 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 MBTD1Q05BQ5 628 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 GFPT1Q06210 699 aaPredicted RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 LAMTOR4Q0VGL1 99 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 RUNX3Q13761 415 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 TEAD2Q15562 447 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 Q4G0T1 1027 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 LYSMD4Q5XG99 296 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 SLC27A1Q6PCB7 646 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 SLC36A4Q6YBV0 504 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 SLCO6A1Q86UG4 719 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 NAXDQ8IW45 347 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 C4orf19Q8IY42 314 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 TSTD1Q8NFU3 115 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 NCOA7Q8NI08 942 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 EXOC6Q8TAG9 804 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 USP33Q8TEY7 942 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 PRPF31Q8WWY3 499 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 PIGKQ92643 395 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF668Q96K58 619 aaPredicted RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 NLRP4Q96MN2 994 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 PPP1R10Q96QC0 940 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 CORO1BQ9BR76 489 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ZMYND12Q9H0C1 365 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 UNC45AQ9H3U1 944 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 FAM124BQ9H5Z6 455 aaPredicted RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 RBM28Q9NW13 759 aaKnown RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 MBD1Q9UIS9 605 aaPredicted RBP2.33□□□□□ -2.04
NEDD1-204ENST00000457368 PCOLCE2Q9UKZ9 415 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 MMP17Q9ULZ9 603 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 PCDHGA1Q9Y5H4 931 aa2.33□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF462Q96JM2 2506 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 CACNA1EQ15878 2313 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 SPEGQ15772 3267 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 COL6A6A6NMZ7 2263 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 ASXL3Q9C0F0 2248 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 SH2B2O14492 632 aaPredicted RBP2.32□□□□□ -2.04
NEDD1-204ENST00000457368 PRRG1O14668 218 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 DCLK1O15075 740 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 MSH4O15457 936 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 ALDH1A2O94788 518 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 ERLIN2O94905 339 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 WNT11O96014 354 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 MYBP10242 640 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 C6P13671 934 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 CDC27P30260 824 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 RPL9P32969 192 aaKnown RBP2.32□□□□□ -2.04
NEDD1-204ENST00000457368 EIF2DP41214 584 aaKnown RBP2.32□□□□□ -2.04
NEDD1-204ENST00000457368 PXNP49023 591 aaPredicted RBP2.32□□□□□ -2.04
NEDD1-204ENST00000457368 NAPAP54920 295 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 TFDP1Q14186 410 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 UPP1Q16831 310 aa2.32□□□□□ -2.04
NEDD1-204ENST00000457368 KRTAP21-3Q3LHN1 58 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms