RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 HIC1Q14526 733 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 CHI3L2Q15782 390 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 EFHC1Q5JVL4 640 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 APOBEC3HQ6NTF7 200 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 CCDC174Q6PII3 467 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 UGT2A3Q6UWM9 527 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 FEZF2Q8TBJ5 459 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 JDP2Q8WYK2 163 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 ZNF516Q92618 1163 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 NKD2Q969F2 451 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 SLC13A1Q9BZW2 595 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 XPO7Q9UIA9 1087 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 TBX20Q9UMR3 447 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 IKBKGQ9Y6K9 419 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 COL5A3P25940 1745 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 CCDC160A6NGH7 325 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 I3L4J1 428 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 COPEO14579 308 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 INHBAP08476 426 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 SMIM18P0DKX4 95 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 CDKN2BP42772 138 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 CHN2P52757 468 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 SOX10P56693 466 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 MRPS5P82675 430 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 OTUD4Q01804 1114 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 OGDHQ02218 1023 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 CYP24A1Q07973 514 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 TMEM62Q0P6H9 643 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 TRIP10Q15642 601 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 TFDP3Q5H9I0 405 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 FAM102BQ5T8I3 360 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 SLC39A4Q6P5W5 647 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 PAOXQ6QHF9 649 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 KYAT3Q6YP21 454 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 ZCCHC23Q6ZST2 131 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 ACTL9Q8TC94 416 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 SLC44A1Q8WWI5 657 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 DGCR14Q96DF8 476 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 GCNAQ96QF7 691 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 IQCGQ9H095 443 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 C1orf112Q9NSG2 853 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 RBBP6Q7Z6E9 1792 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 CNTNAP4Q9C0A0 1308 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 C15orf38-AP3S2A0A0A6YYH1 394 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 SMIM31A0A1B0GVY4 71 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TRIM49D1C9J1S8 452 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 KBTBD13C9JR72 458 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 E7ESA3 106 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 KLF11O14901 512 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 COQ9O75208 318 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 RPS6KA4O75676 772 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TMCC1O94876 653 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TOP3BO95985 862 aaKnown RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 IL1BP01584 269 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TFAP2AP05549 437 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 MAPTP10636 758 aaKnown RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 PIM1P11309 404 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 ZNF200P98182 395 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 FOLH1Q04609 750 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 SPP2Q13103 211 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 SMTNL2Q2TAL5 461 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TMEM270Q6UE05 265 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 ARPINQ7Z6K5 226 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 ABRAQ8N0Z2 381 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 PDIK1LQ8N165 341 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 METTL25Q8N6Q8 603 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 SLC35B2Q8TB61 432 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 E2F7Q96AV8 911 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 MFSD14AQ96MC6 490 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 PRICKLE1Q96MT3 831 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 C7orf26Q96N11 449 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 MCEEQ96PE7 176 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 WWP1Q9H0M0 922 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 CYP4F11Q9HBI6 524 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 USP29Q9HBJ7 922 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TMEM165Q9HC07 324 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 PICK1Q9NRD5 415 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 SOX13Q9UN79 622 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 ZNF510Q9Y2H8 683 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 GREB1LQ9C091 1923 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 A0A0J9YVX5 310 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 MYOCOSA0A1B0GUC4 107 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 CAPN8A6NHC0 703 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 ATP9BO43861 1147 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 ATP6V1G1O75348 118 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 POLR2MP0CAP2 368 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 ITGB5P18084 799 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 GNA15P30679 374 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 SERPINB6P35237 376 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 RGS2P41220 211 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 WNT7BP56706 349 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 BASP1P80723 227 aaKnown RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 HPCAP84074 193 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TBL3Q12788 808 aaKnown RBP10.75□□□□□ -0.69
CLIP4-208ENST00000456385 PEX6Q13608 980 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TLR1Q15399 786 aa10.75□□□□□ -0.69
CLIP4-208ENST00000456385 TEX44Q53QW1 395 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms