RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 CD48P09326 243 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 CHRM1P11229 460 aaPredicted RBP18.5■□□□□ 0.55
PTPN6-204ENST00000456013 BACE1P56817 501 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 EIF3EP60228 445 aaKnown RBP18.5■□□□□ 0.55
PTPN6-204ENST00000456013 SH2D5Q6ZV89 423 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 TAB3Q8N5C8 712 aaPredicted RBP18.5■□□□□ 0.55
PTPN6-204ENST00000456013 SLC44A1Q8WWI5 657 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 DNAJC9Q8WXX5 260 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 SERAC1Q96JX3 654 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 TMEM120AQ9BXJ8 343 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 ALG13Q9NP73 1137 aaKnown RBP18.5■□□□□ 0.55
PTPN6-204ENST00000456013 STOML1Q9UBI4 398 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 ELK3P41970 407 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 BASP1P80723 227 aaKnown RBP18.5■□□□□ 0.55
PTPN6-204ENST00000456013 TRPC3Q13507 836 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 TNFAIP1Q13829 316 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 KRT72Q14CN4 511 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 ZBTB33Q86T24 672 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 RFX6Q8HWS3 928 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 NIM1KQ8IY84 436 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 FAM71DQ8N9W8 422 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 TJP2Q9UDY2 1190 aa18.5■□□□□ 0.55
PTPN6-204ENST00000456013 TOM1L1O75674 476 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 DLDP09622 509 aaKnown RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 LINGO3P0C6S8 592 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 SERPINB3P29508 390 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 ICAM3P32942 547 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 ASPAP45381 313 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 CCNHP51946 323 aaPredicted RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 MRPS35P82673 323 aaKnown RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 ZNF200P98182 395 aaPredicted RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 MTM1Q13496 603 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 SURF1Q15526 300 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 TARBP2Q15633 366 aaKnown RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 DSTYKQ6XUX3 929 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 SCARA5Q6ZMJ2 495 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 IGDCC3Q8IVU1 814 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 KCTD6Q8NC69 237 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 CMASQ8NFW8 434 aaPredicted RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 ACAD9Q9H845 621 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 SLC24A3Q9HC58 644 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 CNTN3Q9P232 1028 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 CYTH4Q9UIA0 394 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 IKBKGQ9Y6K9 419 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 IGKV6D-21A0A0A0MT36 114 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 TCRBV9S1A1TA0A576 114 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 MCF2LO15068 1137 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 GYG2O15488 501 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 MSCO60682 206 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 RBP3P10745 1247 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 PSMC1P62191 440 aaKnown RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 CXCL9Q07325 125 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 TMEM132BQ14DG7 1078 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 ZNF699Q32M78 642 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 ARMC2Q8NEN0 867 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 FAM111AQ96PZ2 611 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 TCHPQ9BT92 498 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 MRPL4Q9BYD3 311 aaKnown RBP18.49■□□□□ 0.55
PTPN6-204ENST00000456013 WDR35Q9P2L0 1181 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 TEX264Q9Y6I9 313 aa18.49■□□□□ 0.55
PTPN6-204ENST00000456013 OGTO15294 1046 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 MED7O43513 233 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 SPAG6O75602 509 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 ITGBL1O95965 494 aaPredicted RBP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 INHBAP08476 426 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 VHLP40337 213 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 IRX1P78414 480 aaPredicted RBP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 ZBTB16Q05516 673 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 FAAP100Q0VG06 881 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 KBTBD12Q3ZCT8 623 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 APBB1IPQ7Z5R6 666 aaPredicted RBP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 ZNF333Q96JL9 665 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 XYLT2Q9H1B5 865 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 POLIQ9UNA4 740 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 MGAMO43451 1857 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 ANK1P16157 1881 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 KBTBD13C9JR72 458 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 KLF11O14901 512 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 BGNP21810 368 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 STIP1P31948 543 aaKnown RBP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 EFNA5P52803 228 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 CBLBQ13191 982 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 FAM91A1Q658Y4 838 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 XYLT1Q86Y38 959 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 TTC17Q96AE7 1141 aa18.48■□□□□ 0.55
PTPN6-204ENST00000456013 MMADHCQ9H3L0 296 aaPredicted RBP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 FBXO6Q9NRD1 293 aaPredicted RBP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 METTL5Q9NRN9 209 aaKnown RBP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 CPSF3Q9UKF6 684 aaKnown RBP18.48■□□□□ 0.55
PTPN6-204ENST00000456013 NVLO15381 856 aaKnown RBP18.47■□□□□ 0.55
PTPN6-204ENST00000456013 PYGBP11216 843 aa18.47■□□□□ 0.55
PTPN6-204ENST00000456013 ACAP1Q15027 740 aa18.47■□□□□ 0.55
PTPN6-204ENST00000456013 MUM1Q2TAK8 710 aa18.47■□□□□ 0.55
PTPN6-204ENST00000456013 ACSBG2Q5FVE4 666 aa18.47■□□□□ 0.55
PTPN6-204ENST00000456013 WDR78Q5VTH9 848 aa18.47■□□□□ 0.55
PTPN6-204ENST00000456013 EMC1Q8N766 993 aa18.47■□□□□ 0.55
PTPN6-204ENST00000456013 SPATA18Q8TC71 538 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms