RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 GARTP22102 1010 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 STIP1P31948 543 aaKnown RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 ALDH18A1P54886 795 aaKnown RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 DYNLT1P63172 113 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 OTUD4Q01804 1114 aaKnown RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 CUL2Q13617 745 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 MAP3K21Q5TCX8 1036 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 TTC39BQ5VTQ0 682 aaPredicted RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SH2D5Q6ZV89 423 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 PTF1AQ7RTS3 328 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 DHDDSQ86SQ9 333 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SPATA24Q86W54 205 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 C4orf19Q8IY42 314 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 TAB3Q8N5C8 712 aaPredicted RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SLC25A41Q8N5S1 370 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 ACTL9Q8TC94 416 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 ZNF516Q92618 1163 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 ACSF2Q96CM8 615 aaPredicted RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 MCEEQ96PE7 176 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 CCDC106Q9BWC9 280 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 KLHL4Q9C0H6 718 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 TCEAL9Q9UHQ7 104 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SOX13Q9UN79 622 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 PPME1Q9Y570 386 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 ADAMTSL1Q8N6G6 1762 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 DHX15O43143 795 aaKnown RBP14.31□□□□□ -0.12
PTPRE-204ENST00000455661 SERPINB2P05120 415 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 ACO1P21399 889 aaKnown RBP14.31□□□□□ -0.12
PTPRE-204ENST00000455661 MMP8P22894 467 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 AQP5P55064 265 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 GDF10P55107 478 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
PTPRE-204ENST00000455661 IRX4P78413 519 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 BASP1P80723 227 aaKnown RBP14.31□□□□□ -0.12
PTPRE-204ENST00000455661 BST1Q10588 318 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 MTM1Q13496 603 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 KBTBD12Q3ZCT8 623 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 EFHC1Q5JVL4 640 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 LGSNQ5TDP6 509 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 ARMC3Q5W041 872 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 SPOPLQ6IQ16 392 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 SLC39A4Q6P5W5 647 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 SORCS3Q9UPU3 1222 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 EFR3BQ9Y2G0 817 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 TCRBV9S1A1TA0A576 114 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 KRT37O76014 449 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 SERPINA6P08185 405 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 KITP10721 976 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 HARSP12081 509 aaKnown RBP14.31□□□□□ -0.12
PTPRE-204ENST00000455661 VAV1P15498 845 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 ELK3P41970 407 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 TAP1Q03518 808 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 ZACNQ401N2 412 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 LMBRD2Q68DH5 695 aaPredicted RBP14.31□□□□□ -0.12
PTPRE-204ENST00000455661 NIPA1Q7RTP0 329 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 OCEL1Q9H607 264 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 AGO4Q9HCK5 861 aaKnown RBP14.31□□□□□ -0.12
PTPRE-204ENST00000455661 ANKEF1Q9NU02 776 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 LMCD1Q9NZU5 365 aa14.31□□□□□ -0.12
PTPRE-204ENST00000455661 SAE1Q9UBE0 346 aaPredicted RBP14.31□□□□□ -0.12
PTPRE-204ENST00000455661 TCRBV7S3A2A0A539 114 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 LGR5O75473 907 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 TMEM63AO94886 807 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 PIM1P11309 404 aaPredicted RBP14.3□□□□□ -0.12
PTPRE-204ENST00000455661 TBXAS1P24557 533 aaPredicted RBP14.3□□□□□ -0.12
PTPRE-204ENST00000455661 ZNF252P-AS1Q0IIN9 211 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 GRM2Q14416 872 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 R3HDM1Q15032 1099 aaKnown RBP14.3□□□□□ -0.12
PTPRE-204ENST00000455661 CHI3L2Q15782 390 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.3□□□□□ -0.12
PTPRE-204ENST00000455661 TXNRD3NBQ6F5E7 133 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
PTPRE-204ENST00000455661 SLC26A11Q86WA9 606 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 NUDCD3Q8IVD9 361 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 SPIRE2Q8WWL2 714 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 FAM84AQ96KN4 292 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 C10orf88Q9H8K7 445 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 C17orf75Q9HAS0 396 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 TBC1D22BQ9NU19 505 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 PLLPQ9Y342 182 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 ASTN2O75129 1339 aaPredicted RBP14.3□□□□□ -0.12
PTPRE-204ENST00000455661 PRR5-ARHGAP8B1AHC4 643 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 TRIM49D1C9J1S8 452 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 CST8O60676 142 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 SNRPAP09012 282 aaKnown RBP14.3□□□□□ -0.12
PTPRE-204ENST00000455661 WEE2P0C1S8 567 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 RPL26P61254 145 aaKnown RBP14.3□□□□□ -0.12
PTPRE-204ENST00000455661 JAG1P78504 1218 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 ARHGAP8P85298 464 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 ITGA9Q13797 1035 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 LRRC36Q1X8D7 754 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 MMEL1Q495T6 779 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 WDR78Q5VTH9 848 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 PLA2G4FQ68DD2 849 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 KLHL23Q8NBE8 558 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 GSTCDQ8NEC7 633 aa14.3□□□□□ -0.12
PTPRE-204ENST00000455661 RAB3IL1Q8TBN0 382 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms