RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PRAMEF19Q5SWL8 479 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 TWF2Q6IBS0 349 aaKnown RBP11.67□□□□□ -0.54
DDR1-240ENST00000454612 SLFN11Q7Z7L1 901 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 LRRC6Q86X45 466 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 MROH7Q68CQ1 1323 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 OGTO15294 1046 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 MOCS2O96007 188 aaPredicted RBP11.67□□□□□ -0.54
DDR1-240ENST00000454612 HNRNPCP07910 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
DDR1-240ENST00000454612 STAG3L1P0CL83 205 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ELK3P41970 407 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 PEX5P50542 639 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ARFIP2P53365 341 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 VGLL4Q14135 290 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 MAP7Q14244 749 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 STAT4Q14765 748 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 FOXR2Q6PJQ5 311 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 RNF135Q8IUD6 432 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 LMO3Q8TAP4 145 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 TMC2Q8TDI7 906 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 RUBCNQ92622 972 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 BORCS6Q96GS4 357 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 FAM161BQ96MY7 647 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 MRIQ9BWK5 157 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 VCX3BQ9H321 246 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 LRRC4Q9HBW1 653 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 VCX3AQ9NNX9 186 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ZC3H7BQ9UGR2 993 aaKnown RBP11.67□□□□□ -0.54
DDR1-240ENST00000454612 TSR3Q9UJK0 312 aaKnown RBP11.67□□□□□ -0.54
DDR1-240ENST00000454612 PYGBP11216 843 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 GARTP22102 1010 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 GTF2A2P52657 109 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ACCSLQ4AC99 568 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ZC3H3Q8IXZ2 948 aaKnown RBP11.67□□□□□ -0.54
DDR1-240ENST00000454612 GPC2Q8N158 579 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 MREGQ8N565 214 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 SLC25A41Q8N5S1 370 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 HASPINQ8TF76 798 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 TEKT4Q8WW24 435 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ACAP3Q96P50 834 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 FERMT1Q9BQL6 677 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 R3HDMLQ9H3Y0 253 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 CACNG4Q9UBN1 327 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 PIN4Q9Y237 131 aaKnown RBP11.67□□□□□ -0.54
DDR1-240ENST00000454612 AFG3L2Q9Y4W6 797 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 NCANO14594 1321 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 LACTBL1A8MY62 500 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 FZD9O00144 591 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 SRGAP2BP0DMP2 458 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 BGNP21810 368 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ALDH5A1P51649 535 aaPredicted RBP11.66□□□□□ -0.54
DDR1-240ENST00000454612 NOMO3P69849 1222 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 TFDP3Q5H9I0 405 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ARID3BQ8IVW6 561 aaPredicted RBP11.66□□□□□ -0.54
DDR1-240ENST00000454612 UNC45BQ8IWX7 931 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ATP11CQ8NB49 1132 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 USP6NLQ92738 828 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 FAM136AQ96C01 138 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 SETD4Q9NVD3 440 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ASNSD1Q9NWL6 643 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 NOD1Q9Y239 953 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ZNF711Q9Y462 761 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
DDR1-240ENST00000454612 CYP1A2P05177 515 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 KRT7P08729 469 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 MIPP30301 263 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 IREB2P48200 963 aaKnown RBP11.66□□□□□ -0.54
DDR1-240ENST00000454612 PAPOLAP51003 745 aaKnown RBP11.66□□□□□ -0.54
DDR1-240ENST00000454612 SEPT6Q14141 434 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 DCAF6Q58WW2 860 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ZC3H12AQ5D1E8 599 aaKnown RBP11.66□□□□□ -0.54
DDR1-240ENST00000454612 PID1Q7Z2X4 250 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 TCP10LQ8TDR4 215 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 PAFAH2Q99487 392 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 OSMRQ99650 979 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 CGRRF1Q99675 332 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 TRIM55Q9BYV6 548 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 SPATC1LQ9H0A9 340 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 HEY2Q9UBP5 337 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 SLC12A6Q9UHW9 1150 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 E5RJQ4 531 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 NEMP1O14524 444 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 NAMPTP43490 491 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 NDST1P52848 882 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 TMEM132DQ14C87 1099 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 GOLGA7BQ2TAP0 167 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 LGSNQ5TDP6 509 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ANKRD22Q5VYY1 191 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 C16orf46Q6P387 395 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 SLC9A9Q8IVB4 645 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 EXT2Q93063 718 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 RMDN2Q96LZ7 410 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 TSNARE1Q96NA8 513 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 GMLQ99445 158 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ZDHHC18Q9NUE0 388 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 TMEM59LQ9UK28 342 aa11.66□□□□□ -0.54
DDR1-240ENST00000454612 ADCY3O60266 1144 aa11.65□□□□□ -0.54
DDR1-240ENST00000454612 KCNA2P16389 499 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms