RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CACNA2D1P54289 1103 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 YWHAEP62258 255 aaKnown RBP21.17■□□□□ 0.98
COL9A3-202ENST00000452372 KCNJ12Q14500 433 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 SKOR2Q2VWA4 1001 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-202ENST00000452372 TCP11X2Q5H9J9 407 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 FAM35AQ86V20 835 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 TRMT2BQ96GJ1 504 aaKnown RBP21.17■□□□□ 0.98
COL9A3-202ENST00000452372 TMEM176AQ96HP8 235 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 MED10Q9BTT4 135 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 GPR88Q9GZN0 384 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 INTS2Q9H0H0 1204 aaKnown RBP21.17■□□□□ 0.98
COL9A3-202ENST00000452372 TMEM30AQ9NV96 361 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 F8VP50 259 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 CCDC130P13994 396 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 PRKCSHP14314 528 aaPredicted RBP21.16■□□□□ 0.98
COL9A3-202ENST00000452372 CDC25CP30307 473 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 NBL1P41271 181 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 RAD23BP54727 409 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 MYL5Q02045 173 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 GCNT1Q02742 428 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 TEAD2Q15562 447 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 VWA3BQ502W6 1294 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 ZNF394Q53GI3 561 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 MIIPQ5JXC2 388 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 CDKAL1Q5VV42 579 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 GBP6Q6ZN66 633 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 MTSS1LQ765P7 747 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 CCDC105Q8IYK2 499 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 PPM1KQ8N3J5 372 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 UBR7Q8N806 425 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 SLC4A11Q8NBS3 891 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 STKLD1Q8NE28 680 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 SLC2A14Q8TDB8 520 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 CYFIP2Q96F07 1278 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 SMARCD1Q96GM5 515 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 HEXIM2Q96MH2 286 aaKnown RBP21.16■□□□□ 0.98
COL9A3-202ENST00000452372 HNRNPABQ99729 332 aaKnown RBP21.16■□□□□ 0.98
COL9A3-202ENST00000452372 NAT10Q9H0A0 1025 aaKnown RBP21.16■□□□□ 0.98
COL9A3-202ENST00000452372 ATXN3LQ9H3M9 355 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 NDST4Q9H3R1 872 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 SLC2A4RGQ9NR83 387 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 FAM49BQ9NUQ9 324 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 FANCLQ9NW38 375 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 GCNT4Q9P109 453 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 UXTQ9UBK9 157 aaPredicted RBP21.16■□□□□ 0.98
COL9A3-202ENST00000452372 CA14Q9ULX7 337 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 MAGED2Q9UNF1 606 aaPredicted RBP21.16■□□□□ 0.98
COL9A3-202ENST00000452372 MYH10P35580 1976 aa21.16■□□□□ 0.98
COL9A3-202ENST00000452372 F11P03951 625 aa21.15■□□□□ 0.98
COL9A3-202ENST00000452372 ANO6Q4KMQ2 910 aa21.15■□□□□ 0.98
COL9A3-202ENST00000452372 PHLDB3Q6NSJ2 640 aa21.15■□□□□ 0.98
COL9A3-202ENST00000452372 DENND5BQ6ZUT9 1274 aa21.15■□□□□ 0.98
COL9A3-202ENST00000452372 ARHGEF19Q8IW93 802 aa21.15■□□□□ 0.98
COL9A3-202ENST00000452372 DTWD2Q8NBA8 298 aa21.15■□□□□ 0.98
COL9A3-202ENST00000452372 CRACR2AQ9BSW2 395 aa21.15■□□□□ 0.98
COL9A3-202ENST00000452372 DENND4CQ5VZ89 1909 aa21.15■□□□□ 0.98
COL9A3-202ENST00000452372 GFRA3O60609 400 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 AP1G2O75843 785 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 SLC9A1P19634 815 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 ACO1P21399 889 aaKnown RBP21.14■□□□□ 0.97
COL9A3-202ENST00000452372 GPC5P78333 572 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 EXOC3L4Q17RC7 722 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 ARHGAP15Q53QZ3 475 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 TRIM65Q6PJ69 517 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 RRAGAQ7L523 313 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 ASCL5Q7RTU5 278 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 TMEM150AQ86TG1 271 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 KAT5Q92993 513 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 ZSWIM3Q96MP5 696 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 GCNAQ96QF7 691 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 KCNK16Q96T55 309 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 FUCA2Q9BTY2 467 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 CSNK1G1Q9HCP0 422 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 DMAP1Q9NPF5 467 aaPredicted RBP21.14■□□□□ 0.97
COL9A3-202ENST00000452372 EHD2Q9NZN4 543 aa21.14■□□□□ 0.97
COL9A3-202ENST00000452372 ZNF638Q14966 1978 aaKnown RBP21.14■□□□□ 0.97
COL9A3-202ENST00000452372 GVINP1Q7Z2Y8 2422 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 ADORA2BP29275 332 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 NCAPHQ15003 741 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 PPP1R26Q5T8A7 1209 aaPredicted RBP21.13■□□□□ 0.97
COL9A3-202ENST00000452372 NUP93Q8N1F7 819 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 JAKMIP2Q96AA8 810 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 FAM81BQ96LP2 452 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 KREMEN1Q96MU8 473 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 ASB16Q96NS5 453 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 SMOQ99835 787 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 BPIFA3Q9BQP9 254 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 TTLL2Q9BWV7 592 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 TBC1D17Q9HA65 648 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 KRT82Q9NSB4 513 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 DLGAP2Q9P1A6 1054 aa21.13■□□□□ 0.97
COL9A3-202ENST00000452372 EP300Q09472 2414 aaPredicted RBP21.13■□□□□ 0.97
COL9A3-202ENST00000452372 SYCE3A1L190 88 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 SOBPA7XYQ1 873 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 FAM200BP0CF97 657 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 PON1P27169 355 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 USP46P62068 366 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 FAM78AQ5JUQ0 283 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 STXBP5Q5T5C0 1151 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 GPR158Q5T848 1215 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms