RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 IFNAR2P48551 515 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 ZNF165P49910 485 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 MYL6P60660 151 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 IFRD2Q12894 506 aaPredicted RBP23.05■■□□□ 1.28
C9orf3-208ENST00000451893 STK4Q13043 487 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 FZD5Q13467 585 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 RUNX3Q13761 415 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 ZNF667Q5HYK9 610 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 DENND5BQ6ZUT9 1274 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 TMEM150AQ86TG1 271 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 KIAA2013Q8IYS2 634 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 MLKLQ8NB16 471 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 MYCBPAPQ8TBZ2 947 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 PCED1BQ96HM7 432 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 MED10Q9BTT4 135 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 EBF3Q9H4W6 596 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 CRTAC1Q9NQ79 661 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 TRPM5Q9NZQ8 1165 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 SHISA7A6NL88 538 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 KLRC4O43908 158 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 RPN1P04843 607 aaKnown RBP23.04■■□□□ 1.28
C9orf3-208ENST00000451893 DEKP35659 375 aaKnown RBP23.04■■□□□ 1.28
C9orf3-208ENST00000451893 CASP4P49662 377 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 GRSF1Q12849 480 aaKnown RBP eCLIP23.04■■□□□ 1.28
C9orf3-208ENST00000451893 TRIM68Q6AZZ1 485 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 SCARA5Q6ZMJ2 495 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 SPEM1Q8N4L4 309 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 KIAA0895Q8NCT3 520 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 SPATA17Q96L03 361 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 MYRFLQ96LU7 910 aa23.04■■□□□ 1.28
C9orf3-208ENST00000451893 NR3C1P04150 777 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 FAM163BP0C2L3 166 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 PTPN1P18031 435 aaKnown RBP23.03■■□□□ 1.28
C9orf3-208ENST00000451893 NCOA4Q13772 614 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 MORC3Q14149 939 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 ZNF268Q14587 947 aaPredicted RBP23.03■■□□□ 1.28
C9orf3-208ENST00000451893 MTF1Q14872 753 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 PDGFRLQ15198 375 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 TXNDC11Q6PKC3 985 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 CPA6Q8N4T0 437 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 CEP295NLQ96MC4 621 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 ELOVL4Q9GZR5 314 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 DUS2Q9NX74 493 aaKnown RBP23.03■■□□□ 1.28
C9orf3-208ENST00000451893 GMEB2Q9UKD1 530 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 SMG5Q9UPR3 1016 aaKnown RBP23.03■■□□□ 1.28
C9orf3-208ENST00000451893 MYO15AQ9UKN7 3530 aa23.03■■□□□ 1.28
C9orf3-208ENST00000451893 PTPRDP23468 1912 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 GREB1Q4ZG55 1949 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 MYH10P35580 1976 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 LRRIQ3A6PVS8 624 aaPredicted RBP23.02■■□□□ 1.28
C9orf3-208ENST00000451893 PDXKO00764 312 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 HDCP19113 662 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 ID4P47928 161 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 SATB1Q01826 763 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 TDRD10Q5VZ19 366 aaKnown RBP23.02■■□□□ 1.28
C9orf3-208ENST00000451893 PRR23BQ6ZRT6 265 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 LIMS2Q7Z4I7 341 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 ARL14EPQ8N8R7 260 aaPredicted RBP23.02■■□□□ 1.28
C9orf3-208ENST00000451893 ZNF516Q92618 1163 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 MAN1B1Q9UKM7 699 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 ANAPC1Q9H1A4 1944 aa23.02■■□□□ 1.28
C9orf3-208ENST00000451893 F8VP50 259 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 TADA3O75528 432 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 STAU1O95793 577 aaKnown RBP23.01■■□□□ 1.27
C9orf3-208ENST00000451893 PRR29P0C7W0 189 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 NR1H3Q13133 447 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 ZNF687Q8N1G0 1237 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 SYNPOQ8N3V7 929 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 ZBTB44Q8NCP5 570 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 B3GALNT2Q8NCR0 500 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 RNF214Q8ND24 703 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 PARD3BQ8TEW8 1205 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 ERCC4Q92889 916 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-208ENST00000451893 ATP2A3Q93084 1043 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 TNIP3Q96KP6 325 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 SLITRK1Q96PX8 696 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 CYP2S1Q96SQ9 504 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 IMPG2Q9BZV3 1241 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 CBX8Q9HC52 389 aa23.01■■□□□ 1.27
C9orf3-208ENST00000451893 SMTNL1A8MU46 457 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 KRT13P13646 458 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 PIK3CAP42336 1068 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 PPP3CCP48454 512 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 HEATR6Q6AI08 1181 aaKnown RBP23■■□□□ 1.27
C9orf3-208ENST00000451893 Q6ZS52 159 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 SLC9A9Q8IVB4 645 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 FAM83CQ9BQN1 747 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 DPEP3Q9H4B8 488 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 SMYD3Q9H7B4 428 aa23■■□□□ 1.27
C9orf3-208ENST00000451893 HELZP42694 1942 aaKnown RBP23■■□□□ 1.27
C9orf3-208ENST00000451893 C2orf78A6NCI8 922 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 BIN1O00499 593 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 ARSAP15289 507 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 RAP1GAPP47736 663 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 MAMSTRQ6ZN01 415 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 DCLK2Q8N568 766 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 SUMF1Q8NBK3 374 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 CCDC150Q8NCX0 1101 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 SH3RF2Q8TEC5 729 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 C8orf48Q96LL4 319 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms